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The map label for this gene is yigC [C]

Identifier: 77459652

GI number: 77459652

Start: 3911221

End: 3912606

Strand: Direct

Name: yigC [C]

Synonym: Pfl01_3430

Alternate gene names: 77459652

Gene position: 3911221-3912606 (Clockwise)

Preceding gene: 77459651

Following gene: 77459653

Centisome position: 60.75

GC content: 64.72

Gene sequence:

>1386_bases
ATGACCCGTTCGACGCTCGGCGACTCTCAGGATTTTCACGTATTCATCGACGCCTATCGCCGCCAGTACCCGGACGATGT
GCTGACCATCACCCACCCTCTTTCTGCCGATCAGGACGTCACCGCTCTGGTCGATGCCCTCGCCACTCAGGGCCGCGATC
CGCTGCTGATCTGCGAAAACGTCGGCAACCTCGGCGTGCCGGTGGCGACCAATCTGTTCGCCTCCCGCCGGCGTATCGCC
CGGCTGTTCGGCGTCAGTGCCGCGCAGTTGCACGAAACCTTTCAGATCCGCGCCAACCAGCCAATCGCGCCGCGCTACGT
CGAAACCGGCCCGGTGCTCGACGAAGTCTTCGAAGGCGAAACCCTGGACCTGGCGCTACTGCCGATGCTCAAGCATTTCG
ACAGTGATCGCGGCCCGTACATTACCAACGCGATCATCATCGCCGAGGACCCGCAGACCGGCATCGCCAACATGAGCTAC
CACCGCTCGATGCGTCACGCCCGTCAGGCCCTGGCTACCAGCCTGCACTCGCGCGGGCATCTGTGGCGGATGCTGCAGAC
CGCCCGCGAACGCGGTGAAGAATTGCGCGTGGCCATGGTGGTCGGCGCGCATCCGCTTTTCATGCTCGCCGCCGCTGCAC
GTTTGCCCTACGGCAGCGATGAACGCGCAGTGGCCGGCGGGCTGTTCGGTGCGCCGCTGGAACTGGTCAAGACCCCGCGC
TACGGCATCGGCGTCCCGGCTTACGCCGAATTCGTGCTGGAGGGCGCGATAGACCCGACGGCCTATGCCGAAGAAGGCCC
GTTCGGCGAGTTCAGCGGTTATTCCTCGGATCGCTCTACCAACAACGTGTTGCGCGTCGACACCTTGTTGCGGCGCAAGG
ACGCGTGGCTGGTGGACGTAATGGGCGGGCGTTACGCCGAGCACCTGACCCTGGCGCGGCTGCCACGCGAAGCGGAGATG
AGCGAGAAGCTCAAGGCACGCTTCCCCGCCGTCACCGCCGTGCATTACCCGAACTCCGGCACGCATTTTCATTGCTACGT
GGCGCTGGACCAGAGCCGCGACGGCGAGGCCCGACAGATCATGCTGGCCCTGCTCGGCTGGGATCCGTACCTGAAAACCG
TGATCGCGGTGGACAGCGATATCGACCTCACCGACGACAGCCAGGTGCTGTGGGCATTGGCCACGCATTTCCAGCCGCAC
CTCGACATTTTCACCATCGACGGTTTGCCCGGGAGCCCGCTGGACCCGTCGTCCTCGGTCAATGGCACCACCTCGCGCAT
GGGTCTGGATGCCACGCGCGGCTCGGCGTTCGACGGGATCAAGGCGCAGCTCGATCAGGACGTACTCGAACGCGCGCGGC
AACTGCTTGAAGGTCTGCCATCGTGA

Upstream 100 bases:

>100_bases
GCGCGAAGATGACCCGGCGTTCGCTCGACCGGCAGGCCAACGGCTTGTCGATCGAACGCCAGCCTCACCCCTGCGTGCCT
GCTTTTTACGAGGTGAAACC

Downstream 100 bases:

>100_bases
ACCGTCAGCGGATGGTGGTCGGCATCAGCGGCGCGTCCGGGTTCATCTACGGCGTGCGCCTGCTGGAGCTGCTGGCCGAG
CTGAACATCGAAAGCCATCT

Product: carboxylyase-like protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTRSTLGDSQDFHVFIDAYRRQYPDDVLTITHPLSADQDVTALVDALATQGRDPLLICENVGNLGVPVATNLFASRRRIA
RLFGVSAAQLHETFQIRANQPIAPRYVETGPVLDEVFEGETLDLALLPMLKHFDSDRGPYITNAIIIAEDPQTGIANMSY
HRSMRHARQALATSLHSRGHLWRMLQTARERGEELRVAMVVGAHPLFMLAAAARLPYGSDERAVAGGLFGAPLELVKTPR
YGIGVPAYAEFVLEGAIDPTAYAEEGPFGEFSGYSSDRSTNNVLRVDTLLRRKDAWLVDVMGGRYAEHLTLARLPREAEM
SEKLKARFPAVTAVHYPNSGTHFHCYVALDQSRDGEARQIMLALLGWDPYLKTVIAVDSDIDLTDDSQVLWALATHFQPH
LDIFTIDGLPGSPLDPSSSVNGTTSRMGLDATRGSAFDGIKAQLDQDVLERARQLLEGLPS

Sequences:

>Translated_461_residues
MTRSTLGDSQDFHVFIDAYRRQYPDDVLTITHPLSADQDVTALVDALATQGRDPLLICENVGNLGVPVATNLFASRRRIA
RLFGVSAAQLHETFQIRANQPIAPRYVETGPVLDEVFEGETLDLALLPMLKHFDSDRGPYITNAIIIAEDPQTGIANMSY
HRSMRHARQALATSLHSRGHLWRMLQTARERGEELRVAMVVGAHPLFMLAAAARLPYGSDERAVAGGLFGAPLELVKTPR
YGIGVPAYAEFVLEGAIDPTAYAEEGPFGEFSGYSSDRSTNNVLRVDTLLRRKDAWLVDVMGGRYAEHLTLARLPREAEM
SEKLKARFPAVTAVHYPNSGTHFHCYVALDQSRDGEARQIMLALLGWDPYLKTVIAVDSDIDLTDDSQVLWALATHFQPH
LDIFTIDGLPGSPLDPSSSVNGTTSRMGLDATRGSAFDGIKAQLDQDVLERARQLLEGLPS
>Mature_460_residues
TRSTLGDSQDFHVFIDAYRRQYPDDVLTITHPLSADQDVTALVDALATQGRDPLLICENVGNLGVPVATNLFASRRRIAR
LFGVSAAQLHETFQIRANQPIAPRYVETGPVLDEVFEGETLDLALLPMLKHFDSDRGPYITNAIIIAEDPQTGIANMSYH
RSMRHARQALATSLHSRGHLWRMLQTARERGEELRVAMVVGAHPLFMLAAAARLPYGSDERAVAGGLFGAPLELVKTPRY
GIGVPAYAEFVLEGAIDPTAYAEEGPFGEFSGYSSDRSTNNVLRVDTLLRRKDAWLVDVMGGRYAEHLTLARLPREAEMS
EKLKARFPAVTAVHYPNSGTHFHCYVALDQSRDGEARQIMLALLGWDPYLKTVIAVDSDIDLTDDSQVLWALATHFQPHL
DIFTIDGLPGSPLDPSSSVNGTTSRMGLDATRGSAFDGIKAQLDQDVLERARQLLEGLPS

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=433, Percent_Identity=27.0207852193995, Blast_Score=149, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320748, Length=458, Percent_Identity=22.2707423580786, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 50729; Mature: 50598

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSTLGDSQDFHVFIDAYRRQYPDDVLTITHPLSADQDVTALVDALATQGRDPLLICEN
CCCCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
VGNLGVPVATNLFASRRRIARLFGVSAAQLHETFQIRANQPIAPRYVETGPVLDEVFEGE
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCEECCCCHHHHHHCCC
TLDLALLPMLKHFDSDRGPYITNAIIIAEDPQTGIANMSYHRSMRHARQALATSLHSRGH
CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHH
LWRMLQTARERGEELRVAMVVGAHPLFMLAAAARLPYGSDERAVAGGLFGAPLELVKTPR
HHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
YGIGVPAYAEFVLEGAIDPTAYAEEGPFGEFSGYSSDRSTNNVLRVDTLLRRKDAWLVDV
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCEEEEE
MGGRYAEHLTLARLPREAEMSEKLKARFPAVTAVHYPNSGTHFHCYVALDQSRDGEARQI
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHH
MLALLGWDPYLKTVIAVDSDIDLTDDSQVLWALATHFQPHLDIFTIDGLPGSPLDPSSSV
HHHHHCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
NGTTSRMGLDATRGSAFDGIKAQLDQDVLERARQLLEGLPS
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRSTLGDSQDFHVFIDAYRRQYPDDVLTITHPLSADQDVTALVDALATQGRDPLLICEN
CCCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
VGNLGVPVATNLFASRRRIARLFGVSAAQLHETFQIRANQPIAPRYVETGPVLDEVFEGE
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCEECCCCHHHHHHCCC
TLDLALLPMLKHFDSDRGPYITNAIIIAEDPQTGIANMSYHRSMRHARQALATSLHSRGH
CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHH
LWRMLQTARERGEELRVAMVVGAHPLFMLAAAARLPYGSDERAVAGGLFGAPLELVKTPR
HHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
YGIGVPAYAEFVLEGAIDPTAYAEEGPFGEFSGYSSDRSTNNVLRVDTLLRRKDAWLVDV
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCEEEEE
MGGRYAEHLTLARLPREAEMSEKLKARFPAVTAVHYPNSGTHFHCYVALDQSRDGEARQI
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEECCCCCCHHHHH
MLALLGWDPYLKTVIAVDSDIDLTDDSQVLWALATHFQPHLDIFTIDGLPGSPLDPSSSV
HHHHHCCCHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
NGTTSRMGLDATRGSAFDGIKAQLDQDVLERARQLLEGLPS
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]