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The map label for this gene is 77459633

Identifier: 77459633

GI number: 77459633

Start: 3890522

End: 3891547

Strand: Direct

Name: 77459633

Synonym: Pfl01_3411

Alternate gene names: NA

Gene position: 3890522-3891547 (Clockwise)

Preceding gene: 77459632

Following gene: 77459634

Centisome position: 60.43

GC content: 66.57

Gene sequence:

>1026_bases
ATGGCAACCCCAAGCCGGCATGCCCCTGTCGCTCTGACCCTGAGCCAGCGCCTGCGCCGTGATCCGCAGGCGTTCGAATG
GTTGCAGGCGCTGCTGTTGCTGGAGCGTGAACAGCCGCAGGCCGACGCCCTCGGCTCGGGGACATCGCCACAGGCCGAAG
CGCTGAAATTGCGCGGGCCGCTGACGCCATTATTCGCCGCCAGTCAGATCGAAAGCCTGGAGGAAAACCCCGGTGAACCG
CTGACCCTGAACTCGCCGATGTTCGGCCTCGGCGGCCCCGACGGCCCGCTGCCTTACGCTTATCAGGAATGGCTGCAACA
ACGGGCGCGGGCCAAGGATCATGCGCCCGCCGAGTTCCTCGACCTGTTCCAGCATCGGCTGCTGAGCCTGCTGTACAAGG
TGATGCGCAAACACCGGATCGCCCTCGGTTTCACCACGCCCGGCGCCTCGCCAGTGCAGGCGCAACTGCGGGCGCTGACC
GGGTTGTTGCCCAAATCCCTGCAAGAACGCCAGGCGGTTCCCGACTGCGCCGTTCTGGCCTGCACGGCGTTGTACGCCGA
TGGCCGCCGGTCGTTGGCGGGGTTCGCGGCGATTGTCCGCGAGCAATTTGCCGTGGCGGTGGAACTGAGCGCTTATGAAG
GGGCGTGGCGTGAAATTCCACGCGCCAGCCGCAGCGTCATGAAGGCCGGCGGACGCAATCTGCAACTCGGCCGTAGCGCT
GTCGCCGGTACTCGGGTCTGGGATGAACATGCCGGAATTCGTCTGACGCTGGGGCCGCTGCCATCGACGCAGGCCGCGCG
CTTCTTGCCGGACGGCGAAGCGCATCCGGCACTGGCGAGCCTCGCTGCGCTGTATTTCGGCCCGGATCTAGACGTGAAAC
TGGTGCTGCTGGTGCGCGGTGCGGGGCCGCTGCAACTCGGCCGACAAACCCCGGCCCTGTTGAGCTGGAACGGTGGCCTG
CAACGGCAGACCAGCCTGGCCGTGCAACGGATCGAAACCCGCCTGCGTCAGCTGGAGATCACCTGA

Upstream 100 bases:

>100_bases
TGTTGTTTTCAGCGGTGCTCGCGCAGTTCTTTTCGGTGTACGCCACGGCCAATCGCTTTGTGCGCACGGTGCTCATGCAG
GCAGACAAGGAGGTCAAGGC

Downstream 100 bases:

>100_bases
AATGGAACTGGCCAGCCTGATCGGACGCCTCAACCCGGACAACCGCCGCGCCCTCGAACGTGCCGCGCAACGGTGCTTGC
AGCGCGGGCATCACTTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; T6ss R; Quinoprotein Dehydrogenase; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein Family; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MATPSRHAPVALTLSQRLRRDPQAFEWLQALLLLEREQPQADALGSGTSPQAEALKLRGPLTPLFAASQIESLEENPGEP
LTLNSPMFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFLDLFQHRLLSLLYKVMRKHRIALGFTTPGASPVQAQLRALT
GLLPKSLQERQAVPDCAVLACTALYADGRRSLAGFAAIVREQFAVAVELSAYEGAWREIPRASRSVMKAGGRNLQLGRSA
VAGTRVWDEHAGIRLTLGPLPSTQAARFLPDGEAHPALASLAALYFGPDLDVKLVLLVRGAGPLQLGRQTPALLSWNGGL
QRQTSLAVQRIETRLRQLEIT

Sequences:

>Translated_341_residues
MATPSRHAPVALTLSQRLRRDPQAFEWLQALLLLEREQPQADALGSGTSPQAEALKLRGPLTPLFAASQIESLEENPGEP
LTLNSPMFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFLDLFQHRLLSLLYKVMRKHRIALGFTTPGASPVQAQLRALT
GLLPKSLQERQAVPDCAVLACTALYADGRRSLAGFAAIVREQFAVAVELSAYEGAWREIPRASRSVMKAGGRNLQLGRSA
VAGTRVWDEHAGIRLTLGPLPSTQAARFLPDGEAHPALASLAALYFGPDLDVKLVLLVRGAGPLQLGRQTPALLSWNGGL
QRQTSLAVQRIETRLRQLEIT
>Mature_340_residues
ATPSRHAPVALTLSQRLRRDPQAFEWLQALLLLEREQPQADALGSGTSPQAEALKLRGPLTPLFAASQIESLEENPGEPL
TLNSPMFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFLDLFQHRLLSLLYKVMRKHRIALGFTTPGASPVQAQLRALTG
LLPKSLQERQAVPDCAVLACTALYADGRRSLAGFAAIVREQFAVAVELSAYEGAWREIPRASRSVMKAGGRNLQLGRSAV
AGTRVWDEHAGIRLTLGPLPSTQAARFLPDGEAHPALASLAALYFGPDLDVKLVLLVRGAGPLQLGRQTPALLSWNGGLQ
RQTSLAVQRIETRLRQLEIT

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37082; Mature: 36951

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSRHAPVALTLSQRLRRDPQAFEWLQALLLLEREQPQADALGSGTSPQAEALKLRGP
CCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCCC
LTPLFAASQIESLEENPGEPLTLNSPMFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFL
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
DLFQHRLLSLLYKVMRKHRIALGFTTPGASPVQAQLRALTGLLPKSLQERQAVPDCAVLA
HHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CTALYADGRRSLAGFAAIVREQFAVAVELSAYEGAWREIPRASRSVMKAGGRNLQLGRSA
HHHHHHCCHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHHCCCCCEECCCHH
VAGTRVWDEHAGIRLTLGPLPSTQAARFLPDGEAHPALASLAALYFGPDLDVKLVLLVRG
HHCCHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC
AGPLQLGRQTPALLSWNGGLQRQTSLAVQRIETRLRQLEIT
CCCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATPSRHAPVALTLSQRLRRDPQAFEWLQALLLLEREQPQADALGSGTSPQAEALKLRGP
CCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCCC
LTPLFAASQIESLEENPGEPLTLNSPMFGLGGPDGPLPYAYQEWLQQRARAKDHAPAEFL
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
DLFQHRLLSLLYKVMRKHRIALGFTTPGASPVQAQLRALTGLLPKSLQERQAVPDCAVLA
HHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
CTALYADGRRSLAGFAAIVREQFAVAVELSAYEGAWREIPRASRSVMKAGGRNLQLGRSA
HHHHHHCCHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHHCCCCCEECCCHH
VAGTRVWDEHAGIRLTLGPLPSTQAARFLPDGEAHPALASLAALYFGPDLDVKLVLLVRG
HHCCHHHHCCCCEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC
AGPLQLGRQTPALLSWNGGLQRQTSLAVQRIETRLRQLEIT
CCCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA