| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459597
Identifier: 77459597
GI number: 77459597
Start: 3849669
End: 3850184
Strand: Direct
Name: 77459597
Synonym: Pfl01_3375
Alternate gene names: NA
Gene position: 3849669-3850184 (Clockwise)
Preceding gene: 77459596
Following gene: 77459599
Centisome position: 59.79
GC content: 62.4
Gene sequence:
>516_bases ATGACCACAGCTCTCTCGTCGGCCGTCAAAGGCCTGCACTGGAACCTCGACCGCGCCGGCCAGTGGCTCGCGCCGCTGAC CTTGCGCCTGTTCATCGCCTGGGAATTTTTCGAATCGGGGCTGGAGAAATTCAACGGCCAGAACTGGTTCGAAGACATTC AGGAGCGGTTCCCGTTCCCCTTCGACCACTTGCCCGCCACGCTGAACTGGGAGCTTTCGATGTGGGCCGAGCTGATCTGC GCACTGGCGATCCTGATCGGATTCGGCACGCGGATTTCGGCGATTTCGCTGATTGTCGTGACCGTCGTCGCCACCGCTGC CGTGCACTGGCCGGCAGACTGGTCTTCGCTGAGCGAACTGGCCCAGGGCTACGCGATCACCAACAAGGGCTTCGGCAACT TCAAGCTGCCGGCGATCTACCTCGCCGCACTGGTGCCGCTGGTATTCGCCGGTGCCGGCAAGTTGAGTGTGGATGCGTGG CTGGAGCGGTTTTTCTGGAAACGCGCCAGCCGCTGA
Upstream 100 bases:
>100_bases GAAGGCAAATGCGGCGAAGGCAAGTGCGGCGCCGGCGAATAAGCCTTTTCACGGGGTACGCCAGTGCCCCGTTTTCCCCT TGAATGAATGGAGCCTTCCC
Downstream 100 bases:
>100_bases GGATCAATGCGCCCGGTCCAGCCCCGCCAGCAACGCACTGTCCCGGCTGTAGATGTCCGGCGCGTAAAGCACGCGGCCCT GGCCGTCAACCTGGGCCGTC
Product: DoxX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELIC ALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAW LERFFWKRASR
Sequences:
>Translated_171_residues MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELIC ALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAW LERFFWKRASR >Mature_170_residues TTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELICA LAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWL ERFFWKRASR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 19176; Mature: 19045
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFP CCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC FDHLPATLNWELSMWAELICALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSEL HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWLERFFWKRASR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFP CCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC FDHLPATLNWELSMWAELICALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSEL HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWLERFFWKRASR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]