| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459565
Identifier: 77459565
GI number: 77459565
Start: 3817423
End: 3818673
Strand: Reverse
Name: 77459565
Synonym: Pfl01_3343
Alternate gene names: NA
Gene position: 3818673-3817423 (Counterclockwise)
Preceding gene: 77459566
Following gene: 77459564
Centisome position: 59.31
GC content: 65.07
Gene sequence:
>1251_bases ATGAGTGACGCACTGGGTCTGGCGGGGGCCGCCGCGGCGTTGGGCATCGGCATGCTGGTCGGTCTGGAGCGCGAGCGGCA CAAAGGGCGCGGCGACAGCCGTGCCTGTGCCGGGTTGCGCACGTTCGCGATCACGGCGCTGCTGGGTTACGTCGCGATGC AAGTGGGCGGCGCACTGCTGTTGGGCATTGTGGGCGGCTGTCTGGCGGTGCTGATCGGCGTGGCTTATTGGCGCAGCCTG AGCACTGATCCGGGGCTGACCAGCGAAGTGGCCTTGCTCACGGTGCTGGTACTGGGTGCGCTATGCGGCACAGCGCCGGA ACTGGCAATCGCCATTGGCGTGGTCATGGCGGGGCTGCTGGCTTACCGGCAGAAACTCCATCACTTCGCCCGCAGCCAGT TGAGCGAAGCGGAGATGCGCGATGGGTTGGTGCTGCTGATCGCAGCATTGGTGGTGTTGCCGCTGACGCCTGACCGGTTC ATCGGTCCCTACTCGGCACTCAACCTGCGCACCCTTTGTACATTGACCGTGTTGCTGATGGCCGTCGGCGCCATCGGGCA TATCGCCGTGCGCACGCTGGGTGTGCGCTACGGCTACGCGGTCAGCGCCATCGCGTCCGGTTTCGCCTCCAGCACCATGA CGATTGCGGCGATGGGGCATATCGCCCGCAAAGACCCGGAGCACCTCAAGGTATTGAGTGCGGCGGCCCTGCTGTCGAAC CTGGCCACGGCGGCGCAGGTCGCGCTGATCCTCGGCACGGTCGACACCGCGCTGTTGCCGCACCTGTGGGGGCCGTTGCT GGCCGGGTTTGGCGTAACGCTGCTGTTCAGCCTGGGCCTGCTGTTCCCCAGGCCTGCGGTCGCTGCGAACCAACCGATCA AGGTCGGCGGGGCGTTCAATCTCAAGCTCGCGCTGGCGGTCACGTTGACCATGGCCGGCGTGACGTTTTTGTCTTCGCTG ATGCTCGATCACTTTGGCGAGGCGGGCGTGATGCTGACTGCCGTACTCAGCGGATTCGCCGATGCTCATTCTTCCACGGC GTCGATTGCCACCCTCGCCAAGGGTGGACTGTTGGATTACGCCGCCATTGCGCCGCCCGTGCTGCTGGCGGTCAGCAGTA ACGCATTGAGCAAATGCCTGGTGGCCTGGATCAGTGGCGGACGCCGTTTCGCCGCGTATGTCATACCCGGTCAGATTCTG TTGACCGCTGCCATGTGGGCCGGTCTGCTGGTGGATCGAGCGACGATTTGA
Upstream 100 bases:
>100_bases AGTCACGGATCGATGCGGCCCCCGTGTGGCCAGCGATTGCCGATAGGGCGCCGGTCAATAAGCGTCCCGGGATCACGTAT GCCGATGGTCCGATCCCTTT
Downstream 100 bases:
>100_bases CCGGACACTGACAAAAATCAAAGTGCTCGTCGGTAAAAGGGACAGCCTGAGACTCATTCCCTGCCATCGCTCAATGTCGA GGTGCACCATGTCACAGGAA
Product: transmembrane protein
Products: NA
Alternate protein names: Conserved Membrane Protein; MgtC/SapB Transporter; Mgtc/Sapb Transporter
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSDALGLAGAAAALGIGMLVGLERERHKGRGDSRACAGLRTFAITALLGYVAMQVGGALLLGIVGGCLAVLIGVAYWRSL STDPGLTSEVALLTVLVLGALCGTAPELAIAIGVVMAGLLAYRQKLHHFARSQLSEAEMRDGLVLLIAALVVLPLTPDRF IGPYSALNLRTLCTLTVLLMAVGAIGHIAVRTLGVRYGYAVSAIASGFASSTMTIAAMGHIARKDPEHLKVLSAAALLSN LATAAQVALILGTVDTALLPHLWGPLLAGFGVTLLFSLGLLFPRPAVAANQPIKVGGAFNLKLALAVTLTMAGVTFLSSL MLDHFGEAGVMLTAVLSGFADAHSSTASIATLAKGGLLDYAAIAPPVLLAVSSNALSKCLVAWISGGRRFAAYVIPGQIL LTAAMWAGLLVDRATI
Sequences:
>Translated_416_residues MSDALGLAGAAAALGIGMLVGLERERHKGRGDSRACAGLRTFAITALLGYVAMQVGGALLLGIVGGCLAVLIGVAYWRSL STDPGLTSEVALLTVLVLGALCGTAPELAIAIGVVMAGLLAYRQKLHHFARSQLSEAEMRDGLVLLIAALVVLPLTPDRF IGPYSALNLRTLCTLTVLLMAVGAIGHIAVRTLGVRYGYAVSAIASGFASSTMTIAAMGHIARKDPEHLKVLSAAALLSN LATAAQVALILGTVDTALLPHLWGPLLAGFGVTLLFSLGLLFPRPAVAANQPIKVGGAFNLKLALAVTLTMAGVTFLSSL MLDHFGEAGVMLTAVLSGFADAHSSTASIATLAKGGLLDYAAIAPPVLLAVSSNALSKCLVAWISGGRRFAAYVIPGQIL LTAAMWAGLLVDRATI >Mature_415_residues SDALGLAGAAAALGIGMLVGLERERHKGRGDSRACAGLRTFAITALLGYVAMQVGGALLLGIVGGCLAVLIGVAYWRSLS TDPGLTSEVALLTVLVLGALCGTAPELAIAIGVVMAGLLAYRQKLHHFARSQLSEAEMRDGLVLLIAALVVLPLTPDRFI GPYSALNLRTLCTLTVLLMAVGAIGHIAVRTLGVRYGYAVSAIASGFASSTMTIAAMGHIARKDPEHLKVLSAAALLSNL ATAAQVALILGTVDTALLPHLWGPLLAGFGVTLLFSLGLLFPRPAVAANQPIKVGGAFNLKLALAVTLTMAGVTFLSSLM LDHFGEAGVMLTAVLSGFADAHSSTASIATLAKGGLLDYAAIAPPVLLAVSSNALSKCLVAWISGGRRFAAYVIPGQILL TAAMWAGLLVDRATI
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42546; Mature: 42415
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDALGLAGAAAALGIGMLVGLERERHKGRGDSRACAGLRTFAITALLGYVAMQVGGALL CCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIVGGCLAVLIGVAYWRSLSTDPGLTSEVALLTVLVLGALCGTAPELAIAIGVVMAGLL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AYRQKLHHFARSQLSEAEMRDGLVLLIAALVVLPLTPDRFIGPYSALNLRTLCTLTVLLM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH AVGAIGHIAVRTLGVRYGYAVSAIASGFASSTMTIAAMGHIARKDPEHLKVLSAAALLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAAQVALILGTVDTALLPHLWGPLLAGFGVTLLFSLGLLFPRPAVAANQPIKVGGAFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC LKLALAVTLTMAGVTFLSSLMLDHFGEAGVMLTAVLSGFADAHSSTASIATLAKGGLLDY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH AAIAPPVLLAVSSNALSKCLVAWISGGRRFAAYVIPGQILLTAAMWAGLLVDRATI HHHCCHHHEEECHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDALGLAGAAAALGIGMLVGLERERHKGRGDSRACAGLRTFAITALLGYVAMQVGGALL CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIVGGCLAVLIGVAYWRSLSTDPGLTSEVALLTVLVLGALCGTAPELAIAIGVVMAGLL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AYRQKLHHFARSQLSEAEMRDGLVLLIAALVVLPLTPDRFIGPYSALNLRTLCTLTVLLM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH AVGAIGHIAVRTLGVRYGYAVSAIASGFASSTMTIAAMGHIARKDPEHLKVLSAAALLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAAQVALILGTVDTALLPHLWGPLLAGFGVTLLFSLGLLFPRPAVAANQPIKVGGAFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC LKLALAVTLTMAGVTFLSSLMLDHFGEAGVMLTAVLSGFADAHSSTASIATLAKGGLLDY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH AAIAPPVLLAVSSNALSKCLVAWISGGRRFAAYVIPGQILLTAAMWAGLLVDRATI HHHCCHHHEEECHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA