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The map label for this gene is uspE [H]

Identifier: 77459564

GI number: 77459564

Start: 3816417

End: 3817334

Strand: Reverse

Name: uspE [H]

Synonym: Pfl01_3342

Alternate gene names: 77459564

Gene position: 3817334-3816417 (Counterclockwise)

Preceding gene: 77459565

Following gene: 77459562

Centisome position: 59.29

GC content: 59.91

Gene sequence:

>918_bases
ATGTCACAGGAACCCCGCCTGCTGCTGATCGCTCCGCCCTCCATGCACCACACGCCGGCATTCGATCGTGCCTTGGCATT
GGCGCAGGCGCTGCAAAGACCGCTGCATATCGTGGCATTCGATTATTTACAGGCGCTGGCCGTGGTCGGGCTGTTTGCCC
CCGAACAGGTGGCCGTGGCCCGTGACGCCTACCTGGAGAAGCATCGCCACTGGCTTGAAGAACAGGCAACACGGATGCGT
GGACACGGGATCGTTGTCACGAGCGAAGTGGTCTGGGTTCAGGACCCTTACGCGGAGATTCTGCAGTTCATCAATGAAAT
GCCGCTGGTGATGATCATCAGGGATGCCCACGAAGAGTCGGTCCTGAAACGAGTGTTTTTTACCCCGCTGGACTGGCAAC
TGCTGCGCGATTGCCCGATCCCGGTACACCTCGTGACCAACGCCTTGAACCCACGCCCCCGTCATGTTCTGGCGATCATC
GACGTGCTTCGCAGCGAAGATCAGGATCTGGTGTTCAACGACCAGATTATCGATGCCGCATCGAAGCTGGCCGAGGTGTG
CAATGCCCGGCTGCAGTTGTTGCACGTCTACGATTGGACCGCCGCCTATGCGCAGGACTTCGGGTTTGGTGCGTTGCCGC
TGGCCACCGGTATCTACGAGGCGCTGGGCACAGCACAGCATGAGGCGTTTGCCGCGATGGCCGAGCGTCATGGCGTGTCG
AATGAGTGTCGTCATTTCATCGAAGGTGTGCCGGTGCCGGCCATTTGCCGATTTGTCGAAGAGCAAAACGTCGACGTGAT
CGTGGCGGGGACGGTGCAGAACAAAGGGATGAACAAACTCTTGGGCACCACGGCCGAACAGCTCTTGCACCGGGCACCGT
GCAGTGTGTTGGCGATCAAGCCGGGCAGGGGGCTCTAG

Upstream 100 bases:

>100_bases
GCGACGATTTGACCGGACACTGACAAAAATCAAAGTGCTCGTCGGTAAAAGGGACAGCCTGAGACTCATTCCCTGCCATC
GCTCAATGTCGAGGTGCACC

Downstream 100 bases:

>100_bases
CGTCGGAGCACCGGCGATCGCCCGTACGGACGTTCGCCGGCGACAGAGGCTACAAGTACAGGCTGTGAATGACCTGGCGG
GGATCGTCGGGGTCATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVGLFAPEQVAVARDAYLEKHRHWLEEQATRMR
GHGIVVTSEVVWVQDPYAEILQFINEMPLVMIIRDAHEESVLKRVFFTPLDWQLLRDCPIPVHLVTNALNPRPRHVLAII
DVLRSEDQDLVFNDQIIDAASKLAEVCNARLQLLHVYDWTAAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVS
NECRHFIEGVPVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIKPGRGL

Sequences:

>Translated_305_residues
MSQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVGLFAPEQVAVARDAYLEKHRHWLEEQATRMR
GHGIVVTSEVVWVQDPYAEILQFINEMPLVMIIRDAHEESVLKRVFFTPLDWQLLRDCPIPVHLVTNALNPRPRHVLAII
DVLRSEDQDLVFNDQIIDAASKLAEVCNARLQLLHVYDWTAAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVS
NECRHFIEGVPVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIKPGRGL
>Mature_304_residues
SQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVGLFAPEQVAVARDAYLEKHRHWLEEQATRMRG
HGIVVTSEVVWVQDPYAEILQFINEMPLVMIIRDAHEESVLKRVFFTPLDWQLLRDCPIPVHLVTNALNPRPRHVLAIID
VLRSEDQDLVFNDQIIDAASKLAEVCNARLQLLHVYDWTAAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVSN
ECRHFIEGVPVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIKPGRGL

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=306, Percent_Identity=25.8169934640523, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 34042; Mature: 33911

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVGLFAPEQVAVA
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
RDAYLEKHRHWLEEQATRMRGHGIVVTSEVVWVQDPYAEILQFINEMPLVMIIRDAHEES
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEEEEECCHHHH
VLKRVFFTPLDWQLLRDCPIPVHLVTNALNPRPRHVLAIIDVLRSEDQDLVFNDQIIDAA
HHHHHHCCCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHH
SKLAEVCNARLQLLHVYDWTAAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NECRHFIEGVPVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIK
HHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
PGRGL
CCCCC
>Mature Secondary Structure 
SQEPRLLLIAPPSMHHTPAFDRALALAQALQRPLHIVAFDYLQALAVVGLFAPEQVAVA
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
RDAYLEKHRHWLEEQATRMRGHGIVVTSEVVWVQDPYAEILQFINEMPLVMIIRDAHEES
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEEEEECCHHHH
VLKRVFFTPLDWQLLRDCPIPVHLVTNALNPRPRHVLAIIDVLRSEDQDLVFNDQIIDAA
HHHHHHCCCCCHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHH
SKLAEVCNARLQLLHVYDWTAAYAQDFGFGALPLATGIYEALGTAQHEAFAAMAERHGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NECRHFIEGVPVPAICRFVEEQNVDVIVAGTVQNKGMNKLLGTTAEQLLHRAPCSVLAIK
HHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
PGRGL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]