| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459557
Identifier: 77459557
GI number: 77459557
Start: 3812335
End: 3812691
Strand: Direct
Name: 77459557
Synonym: Pfl01_3335
Alternate gene names: NA
Gene position: 3812335-3812691 (Clockwise)
Preceding gene: 77459553
Following gene: 77459563
Centisome position: 59.21
GC content: 52.38
Gene sequence:
>357_bases GTGTACAAACAATGTCTGGCAGCAGCAGTAACCTTCACCATCAGCCTTTCCGCTCTCGCCTCTCCTGTGCCGCAGGAAGA GCTCGAAGAGTGCCAACGAATAGAAAACTCGGCCAAACAGGTCATGAAAACCAGGCAGCAAGGCGTGCCTATGGCTTCGG TGTGGGAATTGGCCGAAGCGGCAGGTAAGCAGAACGAATATGTGGGTGAAGTGTTCAAGTCGCTGATCCGCGAGGCGTAC GAGATTCCTCAATACTCAAACGAGAGCTTGCAGCAGAAAGCGATCAGCGATTTCCATTCCAATTTCTACAAGGCTTGCAT CGTGACGGCGGAAAAGAGAGCAAACGCAAACGGCTGA
Upstream 100 bases:
>100_bases TGGCCGCGTGCCAGCACCTGGCGCTCTTTCTCCCTGCCTGCAATGGTGGCGCCGAGCCACGAATGATAAGGTTCAGCCTC AAAACCAGGGACGACACCTC
Downstream 100 bases:
>100_bases GCTCAACGAACAAAAAAGAGAGCAGATTCAGGTAATGAATCTGCTCCCTTTTACTGAAGGACTCCTGATTCAGGGCCAGG GAGCTCCATCACCTTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MYKQCLAAAVTFTISLSALASPVPQEELEECQRIENSAKQVMKTRQQGVPMASVWELAEAAGKQNEYVGEVFKSLIREAY EIPQYSNESLQQKAISDFHSNFYKACIVTAEKRANANG
Sequences:
>Translated_118_residues MYKQCLAAAVTFTISLSALASPVPQEELEECQRIENSAKQVMKTRQQGVPMASVWELAEAAGKQNEYVGEVFKSLIREAY EIPQYSNESLQQKAISDFHSNFYKACIVTAEKRANANG >Mature_118_residues MYKQCLAAAVTFTISLSALASPVPQEELEECQRIENSAKQVMKTRQQGVPMASVWELAEAAGKQNEYVGEVFKSLIREAY EIPQYSNESLQQKAISDFHSNFYKACIVTAEKRANANG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13152; Mature: 13152
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKQCLAAAVTFTISLSALASPVPQEELEECQRIENSAKQVMKTRQQGVPMASVWELAEA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGKQNEYVGEVFKSLIREAYEIPQYSNESLQQKAISDFHSNFYKACIVTAEKRANANG HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYKQCLAAAVTFTISLSALASPVPQEELEECQRIENSAKQVMKTRQQGVPMASVWELAEA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGKQNEYVGEVFKSLIREAYEIPQYSNESLQQKAISDFHSNFYKACIVTAEKRANANG HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA