| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459554
Identifier: 77459554
GI number: 77459554
Start: 3809521
End: 3809964
Strand: Reverse
Name: 77459554
Synonym: Pfl01_3332
Alternate gene names: NA
Gene position: 3809964-3809521 (Counterclockwise)
Preceding gene: 77459555
Following gene: 77459550
Centisome position: 59.18
GC content: 45.5
Gene sequence:
>444_bases TTGGAAACGGGGGGAGTCGGAAAAAATAGAGCGGGTCTTTTGATAAATAGATGCGTCCCCATTTTTCGATTTTTTGCACG TCCCCATTTTTTTAGCATTTCTTTGAAACGATTCTTCTATGGTGATCAAATGCTGGATGCCACTTTGAAGATAATAAAAG CTACTCGCTTTGATGACGTCGACCACGACCTCGGGTATGAGTATCGTGGTTATAACTACGAAATACAGAGCGAAGAGGAT ATGTTTCTGATCAGGATTTACGATGACGAACCCGGACAGGCAGCGGTAGTGCGTCCGACGTCGATGTCTAAAAACAAAAA GCTAAGAACGTTAGTCGAGCTTTTACAGTCCGAGCTGGGCGTGTCCAGGGTCTCGCTTTACAAGGGGGATATAGGTTCTT ACGCCGAGATCAATCTTGACAGTTTGACCTTCCTTCCCGCCTGA
Upstream 100 bases:
>100_bases AAGCCAAGGCAAAAACCAGGGGCGTTACGCATATCCGGTCAGTGAAAAATCCAAGCGTTATATCGACCAGTTCGGCATTC CATATGGCAGTTGGTAATTC
Downstream 100 bases:
>100_bases AGCCGGCTGTGAAGGGGTGCCAAGCGTGTTTAGATACTTTTGGTCAAAATCAGTCAGAAAGTAAAGTCGTAAATTTTTGA TCGGTTGCGAAGAGTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues METGGVGKNRAGLLINRCVPIFRFFARPHFFSISLKRFFYGDQMLDATLKIIKATRFDDVDHDLGYEYRGYNYEIQSEED MFLIRIYDDEPGQAAVVRPTSMSKNKKLRTLVELLQSELGVSRVSLYKGDIGSYAEINLDSLTFLPA
Sequences:
>Translated_147_residues METGGVGKNRAGLLINRCVPIFRFFARPHFFSISLKRFFYGDQMLDATLKIIKATRFDDVDHDLGYEYRGYNYEIQSEED MFLIRIYDDEPGQAAVVRPTSMSKNKKLRTLVELLQSELGVSRVSLYKGDIGSYAEINLDSLTFLPA >Mature_147_residues METGGVGKNRAGLLINRCVPIFRFFARPHFFSISLKRFFYGDQMLDATLKIIKATRFDDVDHDLGYEYRGYNYEIQSEED MFLIRIYDDEPGQAAVVRPTSMSKNKKLRTLVELLQSELGVSRVSLYKGDIGSYAEINLDSLTFLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16847; Mature: 16847
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METGGVGKNRAGLLINRCVPIFRFFARPHFFSISLKRFFYGDQMLDATLKIIKATRFDDV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCC DHDLGYEYRGYNYEIQSEEDMFLIRIYDDEPGQAAVVRPTSMSKNKKLRTLVELLQSELG CCCCCCEECCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VSRVSLYKGDIGSYAEINLDSLTFLPA CEEEEEEECCCCCEEEECCCCEEECCC >Mature Secondary Structure METGGVGKNRAGLLINRCVPIFRFFARPHFFSISLKRFFYGDQMLDATLKIIKATRFDDV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCC DHDLGYEYRGYNYEIQSEEDMFLIRIYDDEPGQAAVVRPTSMSKNKKLRTLVELLQSELG CCCCCCEECCCCEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VSRVSLYKGDIGSYAEINLDSLTFLPA CEEEEEEECCCCCEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA