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The map label for this gene is dcrA [H]

Identifier: 77459548

GI number: 77459548

Start: 3802978

End: 3804582

Strand: Reverse

Name: dcrA [H]

Synonym: Pfl01_3326

Alternate gene names: 77459548

Gene position: 3804582-3802978 (Counterclockwise)

Preceding gene: 77459549

Following gene: 77459547

Centisome position: 59.09

GC content: 62.68

Gene sequence:

>1605_bases
ATGACGAGAGATGGATCTCTGGTTGCGGCTCTGCCTGCACCAGTTGTTTTGCCGAAGAATCGCTGGCTGACGCCGACCCT
GCAAAGCATCGCCCTGATGCTGTTGCTGGCCGGGATGAGCCTGGGCGAATGGCCCTTGTACGTCAGCATGCCGCTGGCGG
TGCTGATCGTCTGGCTGCCACGCTTGCGTTCTCGGGCGGTCCCCGATGCTCAACCGGTCGACAGCAGCAGCGCGATGTCC
GAGCTGACTCGCGACCTTTCCTACACCACCAGCCATAACGCGCTGTCAGCCGCTGGCGTGGCGTTTTCCGTCAAGGAGCT
GGCCGGCAAGTTGCAATCGCAACTCGACGCCGCCGCGCAGATCGTCAACAACGCTGAAGTCATGATCGCCACTGAACAGG
CCACTTCGCAGCTCAGCCGTGAAGCCTTGGGCGCAGCCAGCGAAGCCCATCACAGCAGCGCGGCGGGGCGCACCGAACTG
GTGGACTCGATTTCGCGTATGCATCAGCTCAGCCAGCGCGCCAATGCCAGCCGTGAACTGATCGAAGCCTTGAGTCAGCG
CAGCGATGACATTCAGCGCGTGACGCTGGTGATTCAGTCCATCGCCAGTCAGACCAACCTTCTTGCATTGAACGCCGCGA
TTGAAGCCGCCCGGGCCGGCGAGCACGGTCGTGGATTTGCAGTGGTGGCGGACGAAGTGCGCGGCCTGGCGGCTCGTACC
GCGACGGCCACCGGTGAAGTGGGGGAAATGGTCGCCGACATTCAGCAACGCACGGCGCAGGTGGTGGAGCAGATCCGCCA
GCTCTCCGACGATTTACACACGGGTGTCGAGCAGGTTGAGCACACCGGTCAGCACCTGGAAAACATCGCGCGACTGGCGG
CCGGGGTCGAAAGCCAGGTGGGCGAAATCGCCCGAGGCGCGGAAACCAATCGCGAACAGCTCGACAGTCTATTCGCTGCC
ATCGAGCAGATGCGCAGCGATTTGGCTATCAGCGACCAGCAGACTCGTCGTCTGGCCGACGCGGCCGTACAGATGGAAGG
GCAGGCGGAAACCATCAGCGAACGCCTGGCCGAAGTCGGGCTGGATGACTATCACCAACGCATCTACGACCTTGCCCGCG
AAGGCGCCAGCCAGATTGCCGCGCGGTTCGAGGCCGATGTCGAGCAAGGGCGCATCAGCCTTGAAGATCTGTTTGACCGC
CAGTATCAGCCGATTCCCGATACACAACCTGCCAAGTTCCAGACCCGTTTCGACCGCTACACCGATCAGGTACTCCCGGC
GATTCAGGAACCGTTGTTGCCGCGCCACGAAGGCCTGGTGTTCGCCATTGCCTGCACGCAGCAGGGTTACGTGCCGACCC
ACAATCAGGCATTCAGCCAGCCGCTGACCGGGGATGTGCAGGTCGATACCGTCAACAATCGCACCAAACGCAAATTCGCC
GACCGCACCGGCATCCGCTGCGGCAGCCACCAGCAAACGGTGCTGTTGCAGACCTACACCCGCGATACCGGCGAGCTGAT
GCACGACCTGTCGGTGCCGATCATGGTCAAGGGCCGCCACTGGGGCGGGTTGCGTCTGGGCTACAAACCGGAGAATCCGC
GCTGA

Upstream 100 bases:

>100_bases
ATTGACCTGCCACAGACCCACGACTAACGGACCATGGATAATGGCGTTGTAGTGGCGTTTAATGCAGTCACAACAATGAG
AACAAGCGTGGGGTAACGAA

Downstream 100 bases:

>100_bases
GGCATTGTTGCCGGAACTGCAATTAAGCTGTACAGACGCGCAGCTGTTTCATCCTGATCCAGATCATTAACATGCCTACA
TAGTTAGGTTGCTAATGAAG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MTRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSMPLAVLIVWLPRLRSRAVPDAQPVDSSSAMS
ELTRDLSYTTSHNALSAAGVAFSVKELAGKLQSQLDAAAQIVNNAEVMIATEQATSQLSREALGAASEAHHSSAAGRTEL
VDSISRMHQLSQRANASRELIEALSQRSDDIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAART
ATATGEVGEMVADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQVGEIARGAETNREQLDSLFAA
IEQMRSDLAISDQQTRRLADAAVQMEGQAETISERLAEVGLDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDR
QYQPIPDTQPAKFQTRFDRYTDQVLPAIQEPLLPRHEGLVFAIACTQQGYVPTHNQAFSQPLTGDVQVDTVNNRTKRKFA
DRTGIRCGSHQQTVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR

Sequences:

>Translated_534_residues
MTRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSMPLAVLIVWLPRLRSRAVPDAQPVDSSSAMS
ELTRDLSYTTSHNALSAAGVAFSVKELAGKLQSQLDAAAQIVNNAEVMIATEQATSQLSREALGAASEAHHSSAAGRTEL
VDSISRMHQLSQRANASRELIEALSQRSDDIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAART
ATATGEVGEMVADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQVGEIARGAETNREQLDSLFAA
IEQMRSDLAISDQQTRRLADAAVQMEGQAETISERLAEVGLDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDR
QYQPIPDTQPAKFQTRFDRYTDQVLPAIQEPLLPRHEGLVFAIACTQQGYVPTHNQAFSQPLTGDVQVDTVNNRTKRKFA
DRTGIRCGSHQQTVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR
>Mature_533_residues
TRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSMPLAVLIVWLPRLRSRAVPDAQPVDSSSAMSE
LTRDLSYTTSHNALSAAGVAFSVKELAGKLQSQLDAAAQIVNNAEVMIATEQATSQLSREALGAASEAHHSSAAGRTELV
DSISRMHQLSQRANASRELIEALSQRSDDIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAARTA
TATGEVGEMVADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQVGEIARGAETNREQLDSLFAAI
EQMRSDLAISDQQTRRLADAAVQMEGQAETISERLAEVGLDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDRQ
YQPIPDTQPAKFQTRFDRYTDQVLPAIQEPLLPRHEGLVFAIACTQQGYVPTHNQAFSQPLTGDVQVDTVNNRTKRKFAD
RTGIRCGSHQQTVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=289, Percent_Identity=30.1038062283737, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=172, Percent_Identity=38.3720930232558, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788194, Length=264, Percent_Identity=30.6818181818182, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=215, Percent_Identity=31.6279069767442, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI2367378, Length=141, Percent_Identity=38.2978723404255, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 58391; Mature: 58260

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSMPLAVLIVWLP
CCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RLRSRAVPDAQPVDSSSAMSELTRDLSYTTSHNALSAAGVAFSVKELAGKLQSQLDAAAQ
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNNAEVMIATEQATSQLSREALGAASEAHHSSAAGRTELVDSISRMHQLSQRANASREL
HHCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH
IEALSQRSDDIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAART
HHHHHHCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
ATATGEVGEMVADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIARGAETNREQLDSLFAAIEQMRSDLAISDQQTRRLADAAVQMEGQAETISERLAEVG
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
LDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDRQYQPIPDTQPAKFQTRFDRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH
TDQVLPAIQEPLLPRHEGLVFAIACTQQGYVPTHNQAFSQPLTGDVQVDTVNNRTKRKFA
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHH
DRTGIRCGSHQQTVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR
HHCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCCEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure 
TRDGSLVAALPAPVVLPKNRWLTPTLQSIALMLLLAGMSLGEWPLYVSMPLAVLIVWLP
CCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RLRSRAVPDAQPVDSSSAMSELTRDLSYTTSHNALSAAGVAFSVKELAGKLQSQLDAAAQ
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNNAEVMIATEQATSQLSREALGAASEAHHSSAAGRTELVDSISRMHQLSQRANASREL
HHCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH
IEALSQRSDDIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAART
HHHHHHCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
ATATGEVGEMVADIQQRTAQVVEQIRQLSDDLHTGVEQVEHTGQHLENIARLAAGVESQV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIARGAETNREQLDSLFAAIEQMRSDLAISDQQTRRLADAAVQMEGQAETISERLAEVG
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
LDDYHQRIYDLAREGASQIAARFEADVEQGRISLEDLFDRQYQPIPDTQPAKFQTRFDRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHH
TDQVLPAIQEPLLPRHEGLVFAIACTQQGYVPTHNQAFSQPLTGDVQVDTVNNRTKRKFA
HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHH
DRTGIRCGSHQQTVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGYKPENPR
HHCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCCEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]