| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459529
Identifier: 77459529
GI number: 77459529
Start: 3787446
End: 3788861
Strand: Reverse
Name: 77459529
Synonym: Pfl01_3307
Alternate gene names: NA
Gene position: 3788861-3787446 (Counterclockwise)
Preceding gene: 77459530
Following gene: 77459523
Centisome position: 58.85
GC content: 66.31
Gene sequence:
>1416_bases ATGACTCAAACCGATACGACCGTACTGCGTCACGCCGACATCCTGATTGTCGGCGGCGGCCTCAGCGGCACGATGCTGGC GGTGCAATTGCTGCGTTTGCCGGGGCGCAGAAAGATTCTGGTGATCGAGCCCCGGGCCGAACTGGGCCGGGGCGAAGCGT ACAGCGCGGTGGAACTGGGCCACACGCTCAACGGCAATGCGGCGCGGATGAGCGTCGATCCGGACAATGCCGATGACCTG ACTCAATGGCTGACCGATCACATCGCTGGCGGTGGCTGGCCGGAGTCGGATCAGCAACATGTACCGGTCAGCGAACTGTT TCCACCTCGGGGTTTGTTCGGCGTGTATGTGCAGCAGCGTCTGGCGGAGGCGCAGCAGGTGGGCGCCCAACACGGTTCGA CGGTCGAGCATGTGCGCGCCGAAGTGGTCGATGTTCAGGCTTCCGGCGATTCCGTGCTGCTCACTTTGAGTGACGGCCAG CCATTGCAGGGCGCTTTTGCAGTGCTGGCGACCGGGATGTTCCCTGCGGCGCGCACCCCGCAAAAACAATCCAGTGGCCT CAACGCGGCGGCGCTGGATCCGTGGGATGTCGCGGCCATGCGCCAGCTCGATCCGCACTCGAGGGTGCTGATCATCGGTT CCGGCCTGACCATGGTCGATGCCGTGGTGTCGCTGCAGCAGGCCGGGCATCGCGGGCCGATCGAGGTGTTTTCCCGGCAC GGGCTGTTGCCCCATGTGCGTCGGCAGCCGCCGGCGTGGGTGGACTTCCTCGCCGAGGATCACAGCATCCGCACGCCGCG CCAGTTACTGCGCGAATTGCGCCGGCATTGCCGCGACGCCATCGCCCAAGGCATCGACTGGCAGGCGCCGCTCGACACCG TGCGTGCGCACATCGGTCGGTTATGGAGTCAGGCCAGCGATCTGCAGCGCCGGCAATTCGTGCGGCATGTGCGGCCGTGG TGGGAAAGTCATCACCATCGTTCACCGCCGCTGAGCGCGGAACTGGTCGAGCGTCTGCACCGGGAAGGGCGATTGCGCAT TCATGCTGCGTCCTACAAGGGTCTTGAATTGGCGTCGGATGGCGGGGTGAGTATCCGTATTCGCCCTCGCGGCGAGGCCG AAACCCGCGTGGTGCAGGGCGCGGCGTTGATCAATTCCAGCGGCATCGAATACGACTGGCGCCGGGTCGCGCGACCTTTG CCGCAGCAGTTGCTGGCGCGCGGTCTGGTTCGTCCGGGGCCGCTGGCGCTGGGCATCGCAGCCGCGGTGGACGGCGCTGT GCTGGATGCCGAAGGCCGGGTTTCGCCCTGCCTGTTCGCCATGGGCCCGCCGTTGCGTGGCATGTGGTGGGAAAGCACCG CTGTCACCGATGTGGCGTCGCAGGCCAAGGCACTGGCCGCGCGACTGGTGCGCTGA
Upstream 100 bases:
>100_bases TGCAAGTCGCATCGGCATGATAAAAAATGGCATCCGTCTAGACGTCTTCGCGGCGTCTGAATGACACTGGCCCGGGCATA TCCTCAGCTGCGAGAACGGC
Downstream 100 bases:
>100_bases CGCAAAATGCAAGAAACCCCGCTTCGGCGGGGTTTCCTGTTTCTGGCAGCTCAAACCGATCGCTCAGTAGCGCTGATATT TGGAACCGAATTCCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MTQTDTTVLRHADILIVGGGLSGTMLAVQLLRLPGRRKILVIEPRAELGRGEAYSAVELGHTLNGNAARMSVDPDNADDL TQWLTDHIAGGGWPESDQQHVPVSELFPPRGLFGVYVQQRLAEAQQVGAQHGSTVEHVRAEVVDVQASGDSVLLTLSDGQ PLQGAFAVLATGMFPAARTPQKQSSGLNAAALDPWDVAAMRQLDPHSRVLIIGSGLTMVDAVVSLQQAGHRGPIEVFSRH GLLPHVRRQPPAWVDFLAEDHSIRTPRQLLRELRRHCRDAIAQGIDWQAPLDTVRAHIGRLWSQASDLQRRQFVRHVRPW WESHHHRSPPLSAELVERLHREGRLRIHAASYKGLELASDGGVSIRIRPRGEAETRVVQGAALINSSGIEYDWRRVARPL PQQLLARGLVRPGPLALGIAAAVDGAVLDAEGRVSPCLFAMGPPLRGMWWESTAVTDVASQAKALAARLVR
Sequences:
>Translated_471_residues MTQTDTTVLRHADILIVGGGLSGTMLAVQLLRLPGRRKILVIEPRAELGRGEAYSAVELGHTLNGNAARMSVDPDNADDL TQWLTDHIAGGGWPESDQQHVPVSELFPPRGLFGVYVQQRLAEAQQVGAQHGSTVEHVRAEVVDVQASGDSVLLTLSDGQ PLQGAFAVLATGMFPAARTPQKQSSGLNAAALDPWDVAAMRQLDPHSRVLIIGSGLTMVDAVVSLQQAGHRGPIEVFSRH GLLPHVRRQPPAWVDFLAEDHSIRTPRQLLRELRRHCRDAIAQGIDWQAPLDTVRAHIGRLWSQASDLQRRQFVRHVRPW WESHHHRSPPLSAELVERLHREGRLRIHAASYKGLELASDGGVSIRIRPRGEAETRVVQGAALINSSGIEYDWRRVARPL PQQLLARGLVRPGPLALGIAAAVDGAVLDAEGRVSPCLFAMGPPLRGMWWESTAVTDVASQAKALAARLVR >Mature_470_residues TQTDTTVLRHADILIVGGGLSGTMLAVQLLRLPGRRKILVIEPRAELGRGEAYSAVELGHTLNGNAARMSVDPDNADDLT QWLTDHIAGGGWPESDQQHVPVSELFPPRGLFGVYVQQRLAEAQQVGAQHGSTVEHVRAEVVDVQASGDSVLLTLSDGQP LQGAFAVLATGMFPAARTPQKQSSGLNAAALDPWDVAAMRQLDPHSRVLIIGSGLTMVDAVVSLQQAGHRGPIEVFSRHG LLPHVRRQPPAWVDFLAEDHSIRTPRQLLRELRRHCRDAIAQGIDWQAPLDTVRAHIGRLWSQASDLQRRQFVRHVRPWW ESHHHRSPPLSAELVERLHREGRLRIHAASYKGLELASDGGVSIRIRPRGEAETRVVQGAALINSSGIEYDWRRVARPLP QQLLARGLVRPGPLALGIAAAVDGAVLDAEGRVSPCLFAMGPPLRGMWWESTAVTDVASQAKALAARLVR
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51410; Mature: 51279
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTDTTVLRHADILIVGGGLSGTMLAVQLLRLPGRRKILVIEPRAELGRGEAYSAVELG CCCCHHHHHEECCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCHHHHHC HTLNGNAARMSVDPDNADDLTQWLTDHIAGGGWPESDQQHVPVSELFPPRGLFGVYVQQR CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHH LAEAQQVGAQHGSTVEHVRAEVVDVQASGDSVLLTLSDGQPLQGAFAVLATGMFPAARTP HHHHHHHHHCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC QKQSSGLNAAALDPWDVAAMRQLDPHSRVLIIGSGLTMVDAVVSLQQAGHRGPIEVFSRH CHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHC GLLPHVRRQPPAWVDFLAEDHSIRTPRQLLRELRRHCRDAIAQGIDWQAPLDTVRAHIGR CCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LWSQASDLQRRQFVRHVRPWWESHHHRSPPLSAELVERLHREGRLRIHAASYKGLELASD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECC GGVSIRIRPRGEAETRVVQGAALINSSGIEYDWRRVARPLPQQLLARGLVRPGPLALGIA CCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH AAVDGAVLDAEGRVSPCLFAMGPPLRGMWWESTAVTDVASQAKALAARLVR HHHCCEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQTDTTVLRHADILIVGGGLSGTMLAVQLLRLPGRRKILVIEPRAELGRGEAYSAVELG CCCHHHHHEECCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCHHHHHC HTLNGNAARMSVDPDNADDLTQWLTDHIAGGGWPESDQQHVPVSELFPPRGLFGVYVQQR CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHH LAEAQQVGAQHGSTVEHVRAEVVDVQASGDSVLLTLSDGQPLQGAFAVLATGMFPAARTP HHHHHHHHHCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC QKQSSGLNAAALDPWDVAAMRQLDPHSRVLIIGSGLTMVDAVVSLQQAGHRGPIEVFSRH CHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHC GLLPHVRRQPPAWVDFLAEDHSIRTPRQLLRELRRHCRDAIAQGIDWQAPLDTVRAHIGR CCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LWSQASDLQRRQFVRHVRPWWESHHHRSPPLSAELVERLHREGRLRIHAASYKGLELASD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECC GGVSIRIRPRGEAETRVVQGAALINSSGIEYDWRRVARPLPQQLLARGLVRPGPLALGIA CCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH AAVDGAVLDAEGRVSPCLFAMGPPLRGMWWESTAVTDVASQAKALAARLVR HHHCCEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA