| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459431
Identifier: 77459431
GI number: 77459431
Start: 3688176
End: 3689129
Strand: Direct
Name: 77459431
Synonym: Pfl01_3209
Alternate gene names: NA
Gene position: 3688176-3689129 (Clockwise)
Preceding gene: 77459430
Following gene: 77459432
Centisome position: 57.28
GC content: 63.94
Gene sequence:
>954_bases TTGACCCCGATGAACGCCTCCCTGCCGTTCGAACCGGGCATCCGCATCAGCCTCGCCGAGCTGATCGAGATGCGTCACCG CGTGCGCGAAGTGCAGCTGTTTTCGACGCCGAGCCAGCGCAGCCCGCTGATCGGCCTGCACCACTCCAAGTTTCGCGGTC GTGGCGTCGACTTCGATCAGGTGCGGGTCTATCAGGCCGGCGACGACGTGCGCACCATCGACTGGCGCGTCACCGCTCGG ACGCAGGAACCGCACACCAAACTGTTCCATGAAGAACGTGAACGGCCGATTTTCATCATGGTCGAGCAAAGCACGCGGCT GTTTTTCGGCTCCGGACTGATGTTCAAGTCGGTGCTCGCAGCACAGGCTGCGGCGCTGATCGGCTGGGCAGCGCTCGGTC ACAACGACCGGGTTGGCGGGCTGGTGTTCGGCGACAACGAGCATTACGAAATCAAACCGCGCCGTAGCAAGCAGAGCCTG TTGCAACTGCTCAACCGATTGGTGAAGGTCAACCAGTCGCTGCACAGCGAGCGGGAGCCGGATCGCGATGCATTTGGCGT GGCGTTGCGCCGGGCCCGCGAGGTGCTGCGACCGGGCAGCCTGGTGATCGTGATCTGTGACGAGCGCGCGCTGTCCGACA GCGCCGAGCAGCAACTGAGTCTGCTGTCGCGTCATTGCGATCTGCTGATGCTGCCGCTGTCCGATCCGCTGGACCACGCC CTGCCCGCTGCCGGGCTGCTGAGATTCGCCGAACGCGGCGCGCAGCTGGAACTCGACACCCTGAATTTCGACCTGCGCCA GACCTACCGCGCCCAGGCCGAAGCGCGGATCGCCCGCTGGGAATTGCTCGCGCAGAAGCTGCGAGTGCTGCTGATGCCGC TGAGCACTCAGAGCGAAATGGTTGAGCAGATGCGCGAATTCCTTAACCCGCAACGTCCGGGGAAAGGTCGATGA
Upstream 100 bases:
>100_bases ACGTGTTGCGTCACCGCATCATTCTGTCGTTCGAGGCCGAAGCCGCTGGCATCGACCAGGATCGGGTGGTGCAACGGATT CTCGACGTCGTAGCCGTCGC
Downstream 100 bases:
>100_bases ACGGCCTCGAACAACTGCAACCGCTGGTCTCCCCGCCACCGATTGCCTTCTGGCCGCCGGCACCGGGCTGGTGGCTGCTG CTTTTGCTGTTGCCGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTPMNASLPFEPGIRISLAELIEMRHRVREVQLFSTPSQRSPLIGLHHSKFRGRGVDFDQVRVYQAGDDVRTIDWRVTAR TQEPHTKLFHEERERPIFIMVEQSTRLFFGSGLMFKSVLAAQAAALIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSL LQLLNRLVKVNQSLHSEREPDRDAFGVALRRAREVLRPGSLVIVICDERALSDSAEQQLSLLSRHCDLLMLPLSDPLDHA LPAAGLLRFAERGAQLELDTLNFDLRQTYRAQAEARIARWELLAQKLRVLLMPLSTQSEMVEQMREFLNPQRPGKGR
Sequences:
>Translated_317_residues MTPMNASLPFEPGIRISLAELIEMRHRVREVQLFSTPSQRSPLIGLHHSKFRGRGVDFDQVRVYQAGDDVRTIDWRVTAR TQEPHTKLFHEERERPIFIMVEQSTRLFFGSGLMFKSVLAAQAAALIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSL LQLLNRLVKVNQSLHSEREPDRDAFGVALRRAREVLRPGSLVIVICDERALSDSAEQQLSLLSRHCDLLMLPLSDPLDHA LPAAGLLRFAERGAQLELDTLNFDLRQTYRAQAEARIARWELLAQKLRVLLMPLSTQSEMVEQMREFLNPQRPGKGR >Mature_316_residues TPMNASLPFEPGIRISLAELIEMRHRVREVQLFSTPSQRSPLIGLHHSKFRGRGVDFDQVRVYQAGDDVRTIDWRVTART QEPHTKLFHEERERPIFIMVEQSTRLFFGSGLMFKSVLAAQAAALIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSLL QLLNRLVKVNQSLHSEREPDRDAFGVALRRAREVLRPGSLVIVICDERALSDSAEQQLSLLSRHCDLLMLPLSDPLDHAL PAAGLLRFAERGAQLELDTLNFDLRQTYRAQAEARIARWELLAQKLRVLLMPLSTQSEMVEQMREFLNPQRPGKGR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 36180; Mature: 36049
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMNASLPFEPGIRISLAELIEMRHRVREVQLFSTPSQRSPLIGLHHSKFRGRGVDFDQ CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCHHH VRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSTRLFFGSGLMFKSVLA EEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHHHH AQAAALIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSLLQLLNRLVKVNQSLHSEREP HHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC DRDAFGVALRRAREVLRPGSLVIVICDERALSDSAEQQLSLLSRHCDLLMLPLSDPLDHA CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHH LPAAGLLRFAERGAQLELDTLNFDLRQTYRAQAEARIARWELLAQKLRVLLMPLSTQSEM CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VEQMREFLNPQRPGKGR HHHHHHHCCCCCCCCCC >Mature Secondary Structure TPMNASLPFEPGIRISLAELIEMRHRVREVQLFSTPSQRSPLIGLHHSKFRGRGVDFDQ CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCHHH VRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSTRLFFGSGLMFKSVLA EEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCHHHHHHHH AQAAALIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSLLQLLNRLVKVNQSLHSEREP HHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC DRDAFGVALRRAREVLRPGSLVIVICDERALSDSAEQQLSLLSRHCDLLMLPLSDPLDHA CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHH LPAAGLLRFAERGAQLELDTLNFDLRQTYRAQAEARIARWELLAQKLRVLLMPLSTQSEM CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VEQMREFLNPQRPGKGR HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]