| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459426
Identifier: 77459426
GI number: 77459426
Start: 3679575
End: 3680027
Strand: Direct
Name: 77459426
Synonym: Pfl01_3204
Alternate gene names: NA
Gene position: 3679575-3680027 (Clockwise)
Preceding gene: 77459425
Following gene: 77459427
Centisome position: 57.15
GC content: 57.62
Gene sequence:
>453_bases ATGACCGACTCTCCCACTTATCAGGTGATCACCATGAAAGTCCTGCACTTGCTTGCCGCCCCGCTCGCCGCTCTGGCCCT CACCATCAGCGCTTCGGCACTGGCCCACGGTACCGATTCCCCGTCCGAGAAAATCTCGGTGCTGCAGGATCAGATGCTGA AAAACGTCCCGGGCAAAAAAGCCATGATGATCGAAGTCGATTACAAACCCGGCCAGTCCTCGATCGCCCACAAACACGAC GGCACCGCCATGGCCTACGTGCTCGAAGGCGAGATCGTTTCCCAGGTCAAGGGTGAGCAACCGATCACCTACAAGAAGGG CCAGTACTGGTACGAGCCGGCCGGCTCCGAGCATTTGATCTCGAAAAACGCCAGCAAGAGCAAGCCGGCCAGGTTGCTGG TGTTCATGGTGCTGTCACCCGACGAGCAAGTGCTGATCCCATTGAAAAACTGA
Upstream 100 bases:
>100_bases CCAGCGATGGCGTATTTGAATGCGCTGAAATCCCCCAGATTGGTCCCCCGAACTTCCCGAATATTGGCCGTTTGAATACC CCGGCACGCGGACTACTGTG
Downstream 100 bases:
>100_bases TGGTTGTTTAACCAGCCATAAATAAAAGGCGGAAATTTTTGATTTGCGCCTTTTTTATTTCTCGCGGCAATTAATCAAAA ATGCTTACAACCAATAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Domain-Containing
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHD GTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN
Sequences:
>Translated_150_residues MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHD GTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN >Mature_149_residues TDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHDG TAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16316; Mature: 16185
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE AMMIEVDYKPGQSSIAHKHDGTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLI EEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEECCCEEECCCCCCCEE SKNASKSKPARLLVFMVLSPDEQVLIPLKN CCCCCCCCCCEEEEEEEECCCCEEEEEECC >Mature Secondary Structure TDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE AMMIEVDYKPGQSSIAHKHDGTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLI EEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEECCCEEECCCCCCCEE SKNASKSKPARLLVFMVLSPDEQVLIPLKN CCCCCCCCCCEEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA