Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459417

Identifier: 77459417

GI number: 77459417

Start: 3672912

End: 3673364

Strand: Direct

Name: 77459417

Synonym: Pfl01_3195

Alternate gene names: NA

Gene position: 3672912-3673364 (Clockwise)

Preceding gene: 77459413

Following gene: 77459418

Centisome position: 57.05

GC content: 62.03

Gene sequence:

>453_bases
ATGAACCGGTGCAGGCAGCAGGGTTTTACGCTGATCGAGTTGATGGTGGTGCTGGTGATCATCGGTATCGCCAGTGCGGC
GATCAGTCTGAGTATCAAGCCCGATCCGTTGCAGTTGCTGCGCAAGGACGCCGAGCGCGTGGCGCAGTTGCTGCAGATTG
CCCAGGCTGAGGCCCGCGCCGATGGCCGGCCGATTGCGTGGTTGAGCGATGGCAAGGGGTTTCGGTTCAGTCGGCGCAGT
GACAGTGGCAAGGGCTTTGATCATTTCGATCGGGACCCGCAGTTGCGGCCGCGTCCCTGGCAGAGTCCGAAGCTGGAGGT
GCGGGTGGAGCCGAAGCAGAAGGTGGTGCTCAACGCCGAGTGGATCAATCCGCCGCTGCAGTTGACGCTGTCTGACGGGC
TCAATCGGTTGAGTGTGCTGCGCGATGCTTCGGGCCGGATTAGCGTGCAATGA

Upstream 100 bases:

>100_bases
CTACGCGGCAATTCTCACGGTTTTATTTCACACGCCTTACATGTTGGCCGTGCAGGATGGTTTTTTGGGACGGGGCTGGA
CGCAAGGGAGTGCGCATTCG

Downstream 100 bases:

>100_bases
ACAGACAACAAGGTTTTACGCTGATCGAGGTGATGGTCGCGATTCTGTTGATGGCGGTGGTCAGTCTGATTGCCTGGAAG
GGGCTGGACAGTGTCACGCG

Product: general secretion pathway protein H

Products: NA

Alternate protein names: General Secretion Pathway Protein GspH; Type II Secretion Pathway Protein H; Type II Secretion System Protein; Type II Secretion System Protein G; General Secretory Pathway Protein H/U

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNRCRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQIAQAEARADGRPIAWLSDGKGFRFSRRS
DSGKGFDHFDRDPQLRPRPWQSPKLEVRVEPKQKVVLNAEWINPPLQLTLSDGLNRLSVLRDASGRISVQ

Sequences:

>Translated_150_residues
MNRCRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQIAQAEARADGRPIAWLSDGKGFRFSRRS
DSGKGFDHFDRDPQLRPRPWQSPKLEVRVEPKQKVVLNAEWINPPLQLTLSDGLNRLSVLRDASGRISVQ
>Mature_150_residues
MNRCRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQIAQAEARADGRPIAWLSDGKGFRFSRRS
DSGKGFDHFDRDPQLRPRPWQSPKLEVRVEPKQKVVLNAEWINPPLQLTLSDGLNRLSVLRDASGRISVQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16861; Mature: 16861

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRCRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQIAQAEARA
CCCHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DGRPIAWLSDGKGFRFSRRSDSGKGFDHFDRDPQLRPRPWQSPKLEVRVEPKQKVVLNAE
CCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEE
WINPPLQLTLSDGLNRLSVLRDASGRISVQ
ECCCCEEEEHHHCCHHHHHHHCCCCEEECC
>Mature Secondary Structure
MNRCRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQIAQAEARA
CCCHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DGRPIAWLSDGKGFRFSRRSDSGKGFDHFDRDPQLRPRPWQSPKLEVRVEPKQKVVLNAE
CCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEE
WINPPLQLTLSDGLNRLSVLRDASGRISVQ
ECCCCEEEEHHHCCHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA