| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459402
Identifier: 77459402
GI number: 77459402
Start: 3661140
End: 3661520
Strand: Direct
Name: 77459402
Synonym: Pfl01_3180
Alternate gene names: NA
Gene position: 3661140-3661520 (Clockwise)
Preceding gene: 77459392
Following gene: 77459404
Centisome position: 56.86
GC content: 62.47
Gene sequence:
>381_bases ATGCGCACCCCCTCCCCGCAAGCCGGATTCACCCTGATTGAAGTACTCGTCGCGCTGGCGATCATCGCCGTCGCCATGTC CGCCGCCGTGCGCGTCGCGGGGTTGATGACGCAGAGCAGCGGGGTTTTGCGGGATCGGTCGATTGCGATGATTGCGGCGC AGAGTCGGATGGCTGAACTTCGGTTGGAAGGGAAATTGCCGATGGGGGTTAAGGCAATGGAGTGTGATCAGGGGCGGTTG TTGTTGCGGTGTGAGCAGGTGATCGCAGCGGCAGAGAGTGGGCGGTTGCTCAAGGTTGGGGTGCAGGTTTTTGATCGGGG TCAGGATCGGCCCCCTTTGGCTCGGCTTGAAACGTTGCTCAGCCGCCCGGAACCCCCCTAG
Upstream 100 bases:
>100_bases AAGATATGTCAGGGATGTTGAAAATCCTCGGGTGTTTTCGTCGTCAAGCCGTCAAGCACGGGCGTTAGCGTCAAGGGCTG CCCGACCGCCCGAGCCCCCG
Downstream 100 bases:
>100_bases CCTGCTCAAAAACGTCAGGCACGATGTATAAGGCACAGATCGGAATCCTTGAGGACCTCGCGCCTCAAATCTCCCGATCC TCACTCAAAACCATTGAATC
Product: general secretion pathway protein I
Products: NA
Alternate protein names: HxcV Pseudopilin; General Secretion Pathway Protein GspI; Type II Secretion System; General Secretory Pathway Protein I/V; Type II Secretion System Exported Protein I
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRTPSPQAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSIAMIAAQSRMAELRLEGKLPMGVKAMECDQGRL LLRCEQVIAAAESGRLLKVGVQVFDRGQDRPPLARLETLLSRPEPP
Sequences:
>Translated_126_residues MRTPSPQAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSIAMIAAQSRMAELRLEGKLPMGVKAMECDQGRL LLRCEQVIAAAESGRLLKVGVQVFDRGQDRPPLARLETLLSRPEPP >Mature_126_residues MRTPSPQAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSIAMIAAQSRMAELRLEGKLPMGVKAMECDQGRL LLRCEQVIAAAESGRLLKVGVQVFDRGQDRPPLARLETLLSRPEPP
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13535; Mature: 13535
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPSPQAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSIAMIAAQSRMAEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLEGKLPMGVKAMECDQGRLLLRCEQVIAAAESGRLLKVGVQVFDRGQDRPPLARLETLL HCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCHHHHHHHHH SRPEPP CCCCCC >Mature Secondary Structure MRTPSPQAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSIAMIAAQSRMAEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLEGKLPMGVKAMECDQGRLLLRCEQVIAAAESGRLLKVGVQVFDRGQDRPPLARLETLL HCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCHHHHHHHHH SRPEPP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA