| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459390
Identifier: 77459390
GI number: 77459390
Start: 3637049
End: 3637996
Strand: Direct
Name: 77459390
Synonym: Pfl01_3168
Alternate gene names: NA
Gene position: 3637049-3637996 (Clockwise)
Preceding gene: 77459378
Following gene: 77459391
Centisome position: 56.49
GC content: 60.76
Gene sequence:
>948_bases ATGACCCCGAACCGCGCGACATTCCCTGTGCGACTGGCGCTGAGCCTGCTCGGCTGCGCCGCGACCCTGCCGGTGCTGGC CACTGAAGCCGGCGTCGACAACATCGGCCCCGGCACCGACGGCTTCTTCATGCTGCCGCTGGAGGTCGACAGCCTTCCGG AGAACATGGTCGCCTTCAACCTCTACTACAACCATTACAAGTCACGAAAGCTCAACATCAGTTCGCTCGGCGGCAAGGTG CCGAATGTCGAGATCGAATCCACCGCCGTCATCCCGCGCATCGACTACCTGAGCCCGGTGCGGATTTTCGGCGGGCGTCT GGCCGGTTACATCGCCCAGCCGTGGCTCAAGCAGGAAGTCTCGGTGTTCGGCCTGAGCGACACCCGTGAAGGCATGGGCG ATACCACCATCGCGCCGATCATCCTGTGGGACATGGGCAAGGACCTGACCCTCGGCGCCGCCGTGGAAATCACCGTGCCC ACCGGCGAATACAGCGTCGATCGACTGGCCAACACCAGCAACAATTTCTACACCTACAAACCGCTGTTCTCCTTCACCTG GCTGCCGACCGAGCGCACCGAGGTGTCGATGAAAACCACCTACAGCTTCAACGAGAAAAACAAGGACACCGACTACAAGT CCGGGCAGATCTTCCACTTCGATTACTCGGCCAGCTACAAGATCACCGACGACCTGATGCTCGGCATCAACGGCTACTAC CTCAAGCAGACCACCGACGACAAACAGTTCGGCCACACCGTGCAATTCGCCGGCGAAGACGAGAACGACGGCGTACGCGG CAAGGTGTTCGCTATCGGCCCGGCGCTGCACTTCACCTTCCTCAAGTACGCCAGCGCCGAGATCCGCTGGGCCAAGGAAT TCGACGTGGAGAACCGGCCAGAAGGGGAAATGCTGTGGGCGAAGGTGAGTATTCCGTATGCGTTCTGA
Upstream 100 bases:
>100_bases AATACCCTGCCCTGTTGTGCGCCAAGGGCTTATTTCTATCGTGGCCGGGCACCCCGAATGCCGGCGTTGCGCCCAAAACA CAATAATAATGAGGACGGAC
Downstream 100 bases:
>100_bases GTGCATTTGTAGGAAGGCGCGCGCGGATTTGTAGGCTGGAAACCTGAAAAACAGAGGGTGGGAATAGGCCTACAGCGGCG GTCGAGATTGCCGGACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTPNRATFPVRLALSLLGCAATLPVLATEAGVDNIGPGTDGFFMLPLEVDSLPENMVAFNLYYNHYKSRKLNISSLGGKV PNVEIESTAVIPRIDYLSPVRIFGGRLAGYIAQPWLKQEVSVFGLSDTREGMGDTTIAPIILWDMGKDLTLGAAVEITVP TGEYSVDRLANTSNNFYTYKPLFSFTWLPTERTEVSMKTTYSFNEKNKDTDYKSGQIFHFDYSASYKITDDLMLGINGYY LKQTTDDKQFGHTVQFAGEDENDGVRGKVFAIGPALHFTFLKYASAEIRWAKEFDVENRPEGEMLWAKVSIPYAF
Sequences:
>Translated_315_residues MTPNRATFPVRLALSLLGCAATLPVLATEAGVDNIGPGTDGFFMLPLEVDSLPENMVAFNLYYNHYKSRKLNISSLGGKV PNVEIESTAVIPRIDYLSPVRIFGGRLAGYIAQPWLKQEVSVFGLSDTREGMGDTTIAPIILWDMGKDLTLGAAVEITVP TGEYSVDRLANTSNNFYTYKPLFSFTWLPTERTEVSMKTTYSFNEKNKDTDYKSGQIFHFDYSASYKITDDLMLGINGYY LKQTTDDKQFGHTVQFAGEDENDGVRGKVFAIGPALHFTFLKYASAEIRWAKEFDVENRPEGEMLWAKVSIPYAF >Mature_314_residues TPNRATFPVRLALSLLGCAATLPVLATEAGVDNIGPGTDGFFMLPLEVDSLPENMVAFNLYYNHYKSRKLNISSLGGKVP NVEIESTAVIPRIDYLSPVRIFGGRLAGYIAQPWLKQEVSVFGLSDTREGMGDTTIAPIILWDMGKDLTLGAAVEITVPT GEYSVDRLANTSNNFYTYKPLFSFTWLPTERTEVSMKTTYSFNEKNKDTDYKSGQIFHFDYSASYKITDDLMLGINGYYL KQTTDDKQFGHTVQFAGEDENDGVRGKVFAIGPALHFTFLKYASAEIRWAKEFDVENRPEGEMLWAKVSIPYAF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35200; Mature: 35069
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNRATFPVRLALSLLGCAATLPVLATEAGVDNIGPGTDGFFMLPLEVDSLPENMVAFN CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE LYYNHYKSRKLNISSLGGKVPNVEIESTAVIPRIDYLSPVRIFGGRLAGYIAQPWLKQEV EEEECCCCCEEEHHHCCCCCCCEEECCEEEEEECCCCCHHHHHCCHHHHHHHCCHHHCCE SVFGLSDTREGMGDTTIAPIILWDMGKDLTLGAAVEITVPTGEYSVDRLANTSNNFYTYK EEEECCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEEECCCCCCHHHHHCCCCCEEEEC PLFSFTWLPTERTEVSMKTTYSFNEKNKDTDYKSGQIFHFDYSASYKITDDLMLGINGYY CCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEECCEEEECCCCEE LKQTTDDKQFGHTVQFAGEDENDGVRGKVFAIGPALHFTFLKYASAEIRWAKEFDVENRP EEECCCCHHCCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCC EGEMLWAKVSIPYAF CCCEEEEEEECCCCC >Mature Secondary Structure TPNRATFPVRLALSLLGCAATLPVLATEAGVDNIGPGTDGFFMLPLEVDSLPENMVAFN CCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE LYYNHYKSRKLNISSLGGKVPNVEIESTAVIPRIDYLSPVRIFGGRLAGYIAQPWLKQEV EEEECCCCCEEEHHHCCCCCCCEEECCEEEEEECCCCCHHHHHCCHHHHHHHCCHHHCCE SVFGLSDTREGMGDTTIAPIILWDMGKDLTLGAAVEITVPTGEYSVDRLANTSNNFYTYK EEEECCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEEECCCCCCHHHHHCCCCCEEEEC PLFSFTWLPTERTEVSMKTTYSFNEKNKDTDYKSGQIFHFDYSASYKITDDLMLGINGYY CCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEECCEEEECCCCEE LKQTTDDKQFGHTVQFAGEDENDGVRGKVFAIGPALHFTFLKYASAEIRWAKEFDVENRP EEECCCCHHCCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCC EGEMLWAKVSIPYAF CCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA