| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is imuB [H]
Identifier: 77459372
GI number: 77459372
Start: 3618055
End: 3619470
Strand: Reverse
Name: imuB [H]
Synonym: Pfl01_3150
Alternate gene names: 77459372
Gene position: 3619470-3618055 (Counterclockwise)
Preceding gene: 77459373
Following gene: 77459371
Centisome position: 56.22
GC content: 66.88
Gene sequence:
>1416_bases ATGCGCTGGGTTTGCATTCTGTTCCCGCAATTGGCCCTCGACGCCGTGCTGCGTCAGCGCCCCGATCCCGAGCAACCGTT GGCGCTGCTCAGCGGCCCGGCCCAGCGCCGGGTGCTGCAAGCGATCAACCCGGCGGCGCGGGCACTGGGCTTGCGTCCCG GGCAATCGATGACCGCCGCGCAGGCCATGAGCAAAGGGTTCACCACCGTCGATTACGACGTGGCCGAGGTCGAGCACTGG CAGCAGTTTCTCGCCGCCTGGGCCTATCGTTTCAGCGCCCAGGTCAGCGTGCATTATCCGCGCACCGTGGTGTTCGAGAT CGAATCGAGCCTCGGGCTGTTCGGTTCCTGGGTGCAGTTCGAGGCGCGGTTGCGCACGGAGTTGACCGAGCTGGGCTTTC GTCACCGCATCGTCGCCGCGCCCAACCCGGTGGCGGCGCGGGTGTTGGCCAACGCCTATGACGGATTGGTGGTGCCCGAC GGTGAAGCCCTGCGCCATCACCTCGGACAATTGCCGGTCGACCGCATCGGCCTTGAACCGAGCGTGGCCACGGCGCTGTC GCGCATGGGCCTGCGTAACCTCCATCAGGTGCAGAACCTGCCGCGTCAGGCCCTGGCCCGGCGTTTCGAGGCACCGATGC TCAAACACCTGGACACGCTGTTCGGCGCACGGCCGCTGGCGCTGGCGTTCTACCTGCCGCCGGATCGTTTCGACGTGCGC ATCGAACTCAATTTCGACGTGCAGTCCCATCAGGCGCTGCTGTTCCCCTTGCGCCGCCTGACGTCCGATCTGGCGGCGTT TTTGTGCGGCCGCGACAGCGGCGTGCAGCGCTTCGATCTGCATCTGGAACACGCCGGGTTGCCGGACACATTGATCAAGG TCGGCCTGCTCAGCGCCGAACGCGATCCGGCGATGCTCTTTGAACTGGCCCGTGGTCGACTGGAGCAGGTGCAGGTCGAA GCCCCGGTGCGCGGCTTTCGTCTGCGCGCCGAGGATCTGCCGAGTTTCGTGCCGCAGTTTCAGGAACTGTTCGACGACCG CCCGCAGCAGACCTTGCCCTGGGAGCAACTGCGCGAACGCCTGCGCGCACGGCTGGGCGATGAGGCGGTGCAGGGCCTGC GCTTTCAGGCCGATCATCGCCCGGAGTGCGCGTGGCAGAACGCCGACGACAAGCAGCGTTGCCCTGCATTGCCGTGCGTG CAGCGTCCGGGTTGGTTATTGGGCGAGCCGCAGTCGGTGCCCGAAGGTTCGGCGCGCATCCTCATGGGTCCGGAGCGCAT CGAGTCCGGCTGGTGGGACGGTGACGACGTGCGCCGCGACTATTACCTGATCCAGAACCGCGCAGGCCAGCAAGGCTGGG CGTACCGGGCAGTGGGTGAGGTCGGTCCGTTGTGGCTGCAGGGCTGGTTCGCATGA
Upstream 100 bases:
>100_bases GCCATCGATGCCCGCCCGGCGCAATTGCGCGTGCTCAAGTGCCGGGGCGGACTGGCGCGCAGCGCACCGATTGCCTTCAC CGTGGGGCATTGAGGTCGCC
Downstream 100 bases:
>100_bases ACCAGGGTTATGCCGAGCTGCACTGCCTGTCGAATTTCAGTTTCCAGCGCGGCGCGTCCAGTGCGCTGGAACTGTTTCAG CGCGCGAAAAAGCACGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MRWVCILFPQLALDAVLRQRPDPEQPLALLSGPAQRRVLQAINPAARALGLRPGQSMTAAQAMSKGFTTVDYDVAEVEHW QQFLAAWAYRFSAQVSVHYPRTVVFEIESSLGLFGSWVQFEARLRTELTELGFRHRIVAAPNPVAARVLANAYDGLVVPD GEALRHHLGQLPVDRIGLEPSVATALSRMGLRNLHQVQNLPRQALARRFEAPMLKHLDTLFGARPLALAFYLPPDRFDVR IELNFDVQSHQALLFPLRRLTSDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAERDPAMLFELARGRLEQVQVE APVRGFRLRAEDLPSFVPQFQELFDDRPQQTLPWEQLRERLRARLGDEAVQGLRFQADHRPECAWQNADDKQRCPALPCV QRPGWLLGEPQSVPEGSARILMGPERIESGWWDGDDVRRDYYLIQNRAGQQGWAYRAVGEVGPLWLQGWFA
Sequences:
>Translated_471_residues MRWVCILFPQLALDAVLRQRPDPEQPLALLSGPAQRRVLQAINPAARALGLRPGQSMTAAQAMSKGFTTVDYDVAEVEHW QQFLAAWAYRFSAQVSVHYPRTVVFEIESSLGLFGSWVQFEARLRTELTELGFRHRIVAAPNPVAARVLANAYDGLVVPD GEALRHHLGQLPVDRIGLEPSVATALSRMGLRNLHQVQNLPRQALARRFEAPMLKHLDTLFGARPLALAFYLPPDRFDVR IELNFDVQSHQALLFPLRRLTSDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAERDPAMLFELARGRLEQVQVE APVRGFRLRAEDLPSFVPQFQELFDDRPQQTLPWEQLRERLRARLGDEAVQGLRFQADHRPECAWQNADDKQRCPALPCV QRPGWLLGEPQSVPEGSARILMGPERIESGWWDGDDVRRDYYLIQNRAGQQGWAYRAVGEVGPLWLQGWFA >Mature_471_residues MRWVCILFPQLALDAVLRQRPDPEQPLALLSGPAQRRVLQAINPAARALGLRPGQSMTAAQAMSKGFTTVDYDVAEVEHW QQFLAAWAYRFSAQVSVHYPRTVVFEIESSLGLFGSWVQFEARLRTELTELGFRHRIVAAPNPVAARVLANAYDGLVVPD GEALRHHLGQLPVDRIGLEPSVATALSRMGLRNLHQVQNLPRQALARRFEAPMLKHLDTLFGARPLALAFYLPPDRFDVR IELNFDVQSHQALLFPLRRLTSDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAERDPAMLFELARGRLEQVQVE APVRGFRLRAEDLPSFVPQFQELFDDRPQQTLPWEQLRERLRARLGDEAVQGLRFQADHRPECAWQNADDKQRCPALPCV QRPGWLLGEPQSVPEGSARILMGPERIESGWWDGDDVRRDYYLIQNRAGQQGWAYRAVGEVGPLWLQGWFA
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 53321; Mature: 53321
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWVCILFPQLALDAVLRQRPDPEQPLALLSGPAQRRVLQAINPAARALGLRPGQSMTAA CCEEEEECHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCHHHHHHCCCCCCCHHHH QAMSKGFTTVDYDVAEVEHWQQFLAAWAYRFSAQVSVHYPRTVVFEIESSLGLFGSWVQF HHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCHHHHHHHH EARLRTELTELGFRHRIVAAPNPVAARVLANAYDGLVVPDGEALRHHLGQLPVDRIGLEP HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCCHHHHHHHCCCCHHHHCCCH SVATALSRMGLRNLHQVQNLPRQALARRFEAPMLKHLDTLFGARPLALAFYLPPDRFDVR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCEEEE IELNFDVQSHQALLFPLRRLTSDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAE EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCC RDPAMLFELARGRLEQVQVEAPVRGFRLRAEDLPSFVPQFQELFDDRPQQTLPWEQLRER CCHHHHHHHHHCHHHHEEECCCCCHHEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LRARLGDEAVQGLRFQADHRPECAWQNADDKQRCPALPCVQRPGWLLGEPQSVPEGSARI HHHHHCHHHHHCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE LMGPERIESGWWDGDDVRRDYYLIQNRAGQQGWAYRAVGEVGPLWLQGWFA EECHHHHHCCCCCCCHHHHHHHEEECCCCCCCCEEEECCCCCCHHHHCCCC >Mature Secondary Structure MRWVCILFPQLALDAVLRQRPDPEQPLALLSGPAQRRVLQAINPAARALGLRPGQSMTAA CCEEEEECHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCHHHHHHCCCCCCCHHHH QAMSKGFTTVDYDVAEVEHWQQFLAAWAYRFSAQVSVHYPRTVVFEIESSLGLFGSWVQF HHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCHHHHHHHH EARLRTELTELGFRHRIVAAPNPVAARVLANAYDGLVVPDGEALRHHLGQLPVDRIGLEP HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCCHHHHHHHCCCCHHHHCCCH SVATALSRMGLRNLHQVQNLPRQALARRFEAPMLKHLDTLFGARPLALAFYLPPDRFDVR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCEEEE IELNFDVQSHQALLFPLRRLTSDLAAFLCGRDSGVQRFDLHLEHAGLPDTLIKVGLLSAE EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCC RDPAMLFELARGRLEQVQVEAPVRGFRLRAEDLPSFVPQFQELFDDRPQQTLPWEQLRER CCHHHHHHHHHCHHHHEEECCCCCHHEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LRARLGDEAVQGLRFQADHRPECAWQNADDKQRCPALPCVQRPGWLLGEPQSVPEGSARI HHHHHCHHHHHCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE LMGPERIESGWWDGDDVRRDYYLIQNRAGQQGWAYRAVGEVGPLWLQGWFA EECHHHHHCCCCCCCHHHHHHHEEECCCCCCCCEEEECCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA