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The map label for this gene is yejB [H]

Identifier: 77459296

GI number: 77459296

Start: 3517082

End: 3518143

Strand: Direct

Name: yejB [H]

Synonym: Pfl01_3074

Alternate gene names: 77459296

Gene position: 3517082-3518143 (Clockwise)

Preceding gene: 77459295

Following gene: 77459297

Centisome position: 54.63

GC content: 60.08

Gene sequence:

>1062_bases
ATGTGGGCTTACATACTGCGGCGCCTGCTGCTGATCATTCCGACGCTGGTGATTATTCTGCTGGTCAATTTCGTGATCAT
CCAGGCCGCGCCGGGCGGCCCGGTTGAACAGGCCATTGCCCACTTGCAAGGCATCGGCGGCGCCAGTGTCGGCGGTGGTG
CGAGCGAGACCATGAGCGGCACGTCCCGCGCCAGCCGCGGCCTCGATCCGCAGCTGATCAAGGACATCGAAAAACAGTAC
GGCTTCGACAAACCCGCCCATGAACGCCTGTGGCTGATGCTCAAGAATTACGCGCAACTGGATTTCGGCAAAAGCTTTTT
CCGCGGCGCCACGGTCACCGACCTGATCCTGCAGAAAATGCCGGTGACCATTTCCCTTGGCCTGTGGGCGACGCTGATCA
CTTATCTGGTGTCGATCCCGCTGGGCATCCGCAAAGCCGTGCACCACGGCAGCCATTTCGATATCTGGAGCAGCACGGCG
ATCATCATCGGCTACGCCATGCCGGCATTCCTGTTCGCGATGTTCCTGATCGTGGTGTTCGCCGGCGGCACCTCGCTGAA
CTGGTTTCCGGTGCGCGGGCTGGTGTCCGACAACTTCGAATCCCTGTCGACAATGGGCAAGATCACCGACTACTTCTGGC
ATCTGGTGCTGCCGGTCACGGCGCTGGTGATCGGCGGTTTCGCCACCCTGACCATCCTCACCAAGAACTCGTTCCTCAAT
GAAATCACCCGTCAATACGTGGTCACCGCGCGCGCCAAAGGCCTGAGCGAAAACCGGGTGCTCTACGGACACGTGTTCCG
CAACGCGATGCTGCTGGTGGTGTCGGGCATTCCCCAGGCGTTCATCAGCGTATTCTTCGCCGGTTCGTTGCTGATCGAAG
TGATCTTCTCTCTCGACGGTCTGGGGCGCATGAGTTACGAAGCGGCCGTGTCCCGTGATTATCCGGTGGTGTTCGGCTCG
CTGTTCATCTTCACCTTGTTCGGCCTCCTGATAAAACTGATCGGCGACCTGTGCTACACCCTGGTCGACCCGCGCATCGA
CTTCGCCGCGAGGAACGCCTGA

Upstream 100 bases:

>100_bases
AAGCGATCGAGAGCTGGTGGGAAATCAGCAGCACGCCGCTGACCAATCAGCAGATGACGGCCGAGAAGATCAGCCGTGGC
AGACCCGGAGGGCCGCACTG

Downstream 100 bases:

>100_bases
TGTTCAAGCTCTCGCCTCTGGGCCGTCGCCGCTTCGAACGCTTCAAGAAAAACCGCCGGGGCTGGTGGTCGCTGTGGCTG
TTTATCGGTCTGTTCCTGCT

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MWAYILRRLLLIIPTLVIILLVNFVIIQAAPGGPVEQAIAHLQGIGGASVGGGASETMSGTSRASRGLDPQLIKDIEKQY
GFDKPAHERLWLMLKNYAQLDFGKSFFRGATVTDLILQKMPVTISLGLWATLITYLVSIPLGIRKAVHHGSHFDIWSSTA
IIIGYAMPAFLFAMFLIVVFAGGTSLNWFPVRGLVSDNFESLSTMGKITDYFWHLVLPVTALVIGGFATLTILTKNSFLN
EITRQYVVTARAKGLSENRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGS
LFIFTLFGLLIKLIGDLCYTLVDPRIDFAARNA

Sequences:

>Translated_353_residues
MWAYILRRLLLIIPTLVIILLVNFVIIQAAPGGPVEQAIAHLQGIGGASVGGGASETMSGTSRASRGLDPQLIKDIEKQY
GFDKPAHERLWLMLKNYAQLDFGKSFFRGATVTDLILQKMPVTISLGLWATLITYLVSIPLGIRKAVHHGSHFDIWSSTA
IIIGYAMPAFLFAMFLIVVFAGGTSLNWFPVRGLVSDNFESLSTMGKITDYFWHLVLPVTALVIGGFATLTILTKNSFLN
EITRQYVVTARAKGLSENRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGS
LFIFTLFGLLIKLIGDLCYTLVDPRIDFAARNA
>Mature_353_residues
MWAYILRRLLLIIPTLVIILLVNFVIIQAAPGGPVEQAIAHLQGIGGASVGGGASETMSGTSRASRGLDPQLIKDIEKQY
GFDKPAHERLWLMLKNYAQLDFGKSFFRGATVTDLILQKMPVTISLGLWATLITYLVSIPLGIRKAVHHGSHFDIWSSTA
IIIGYAMPAFLFAMFLIVVFAGGTSLNWFPVRGLVSDNFESLSTMGKITDYFWHLVLPVTALVIGGFATLTILTKNSFLN
EITRQYVVTARAKGLSENRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGS
LFIFTLFGLLIKLIGDLCYTLVDPRIDFAARNA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=61.8131868131868, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1789965, Length=362, Percent_Identity=32.5966850828729, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787053, Length=348, Percent_Identity=29.8850574712644, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1787497, Length=349, Percent_Identity=28.080229226361, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1789888, Length=346, Percent_Identity=26.878612716763, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787550, Length=260, Percent_Identity=24.6153846153846, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787761, Length=359, Percent_Identity=23.6768802228412, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38762; Mature: 38762

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAYILRRLLLIIPTLVIILLVNFVIIQAAPGGPVEQAIAHLQGIGGASVGGGASETMSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCC
TSRASRGLDPQLIKDIEKQYGFDKPAHERLWLMLKNYAQLDFGKSFFRGATVTDLILQKM
HHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHC
PVTISLGLWATLITYLVSIPLGIRKAVHHGSHFDIWSSTAIIIGYAMPAFLFAMFLIVVF
CCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AGGTSLNWFPVRGLVSDNFESLSTMGKITDYFWHLVLPVTALVIGGFATLTILTKNSFLN
CCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH
EITRQYVVTARAKGLSENRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDG
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LGRMSYEAAVSRDYPVVFGSLFIFTLFGLLIKLIGDLCYTLVDPRIDFAARNA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MWAYILRRLLLIIPTLVIILLVNFVIIQAAPGGPVEQAIAHLQGIGGASVGGGASETMSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCC
TSRASRGLDPQLIKDIEKQYGFDKPAHERLWLMLKNYAQLDFGKSFFRGATVTDLILQKM
HHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHC
PVTISLGLWATLITYLVSIPLGIRKAVHHGSHFDIWSSTAIIIGYAMPAFLFAMFLIVVF
CCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AGGTSLNWFPVRGLVSDNFESLSTMGKITDYFWHLVLPVTALVIGGFATLTILTKNSFLN
CCCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH
EITRQYVVTARAKGLSENRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDG
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
LGRMSYEAAVSRDYPVVFGSLFIFTLFGLLIKLIGDLCYTLVDPRIDFAARNA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]