| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459292
Identifier: 77459292
GI number: 77459292
Start: 3512377
End: 3513444
Strand: Reverse
Name: 77459292
Synonym: Pfl01_3070
Alternate gene names: NA
Gene position: 3513444-3512377 (Counterclockwise)
Preceding gene: 77459303
Following gene: 77459290
Centisome position: 54.57
GC content: 58.05
Gene sequence:
>1068_bases ATGGACGGTGAGGGTATTCGGTCGCCCGGGTTGTGTCGGGAGCGTGGTCGGGCTCTGCCGTTGCCGGCTCCCGCACTGGA TTCCATTACAGGGGCGGTCATTGATCCGTCATTGAGCAGGGTTGTCGTCAGGATTGCGCCCTGGCCTGGAATGGCGTGCG GGGACCGGGTGGTTTTGAGTTGGCATGGTCTCGATATACAAGGTTTGCCATATCGGCACGACATTTCGCGATCCGTCAGT GAAGGGCAATTGGGCAAGGATATCGTTCTGATCGTACGGGACGCTCACATCGCTGCGCTGGACGGGGGGACTCTGGAAGT CTTCTGGACGTTGACCAGCGTCACGAGATCGGAGCCTGTCACTTCATTGCGTACACAGCTGGACGTTGGGGACATCCGTT ACAGTCTGTTGCCAGCCATCGTCGAGGATGCCGTCGGAGGCAGTCTCGATCCGGCTCGCGTACCCTACGGAACGACTGCC ATTCTTCAACCTTATGCAGGCATGAGTGCAGGCGATCGGGTGCAGTTGATCTGGCAGGGGCCTTCACCGGAGGCATCGTT TCGAGACGCGCTTATCGTTGAGTTCTTTGCTGTTGGTCAGCCTCTGGTGTTCGGGATCGCTCCTGAATTCATCGCCCCGC ATTTTGGGGGCGAGGTGGTGATTCGCTACCGTATCGAGCAGAAGAGCGGAGCCATACACGAGTCAGGTGTTACGCGAGTC AGCATTGCTCCATTGGTACGAGGTGAGCTGCCGGCTCCTCAGGTGCTTGAAGCGGATGATGGAGTGCTCAATGTGACGGA TGCCATCGATGGTGTCAGCGTGCTGATAAGTGATGCGCGAGTCGAGGAGGGCGAGCTGGTTTATCTCAAGTGCGATGGCG AGTCGTTTTTTCACCGTGACGACCGAGAAATCATCAGCGGGATGGCCATGCAGTCTTTGGTGTTCATCGTGCCTTATCGG TTCTGGCGCGAGCACGTCAATACCGTCGTGCGGCTATCCTACTCGGTCGAGCGGCTGGACGACGTCAGTCAGCAGTCCGA GGTGATGTTGCTGCAAGTGCAGGCGTGA
Upstream 100 bases:
>100_bases TCTTCGACACAGCGCTCAGGCGACGTGTCATTTCCAGGGAGTGGAGAGGCAACTGATGAAAGATGCAGAAACTACGGTTT TGCAAGAAAAGGACACAGGG
Downstream 100 bases:
>100_bases TCATCTGTTGTGAACACTGCACCGCCCTCCGTGAGAACGCGCAGCGGAGGGCGGTGTTCACTGTCAGGCTGAGGTCTGTT TTCGCATGCGATGCGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDGEGIRSPGLCRERGRALPLPAPALDSITGAVIDPSLSRVVVRIAPWPGMACGDRVVLSWHGLDIQGLPYRHDISRSVS EGQLGKDIVLIVRDAHIAALDGGTLEVFWTLTSVTRSEPVTSLRTQLDVGDIRYSLLPAIVEDAVGGSLDPARVPYGTTA ILQPYAGMSAGDRVQLIWQGPSPEASFRDALIVEFFAVGQPLVFGIAPEFIAPHFGGEVVIRYRIEQKSGAIHESGVTRV SIAPLVRGELPAPQVLEADDGVLNVTDAIDGVSVLISDARVEEGELVYLKCDGESFFHRDDREIISGMAMQSLVFIVPYR FWREHVNTVVRLSYSVERLDDVSQQSEVMLLQVQA
Sequences:
>Translated_355_residues MDGEGIRSPGLCRERGRALPLPAPALDSITGAVIDPSLSRVVVRIAPWPGMACGDRVVLSWHGLDIQGLPYRHDISRSVS EGQLGKDIVLIVRDAHIAALDGGTLEVFWTLTSVTRSEPVTSLRTQLDVGDIRYSLLPAIVEDAVGGSLDPARVPYGTTA ILQPYAGMSAGDRVQLIWQGPSPEASFRDALIVEFFAVGQPLVFGIAPEFIAPHFGGEVVIRYRIEQKSGAIHESGVTRV SIAPLVRGELPAPQVLEADDGVLNVTDAIDGVSVLISDARVEEGELVYLKCDGESFFHRDDREIISGMAMQSLVFIVPYR FWREHVNTVVRLSYSVERLDDVSQQSEVMLLQVQA >Mature_355_residues MDGEGIRSPGLCRERGRALPLPAPALDSITGAVIDPSLSRVVVRIAPWPGMACGDRVVLSWHGLDIQGLPYRHDISRSVS EGQLGKDIVLIVRDAHIAALDGGTLEVFWTLTSVTRSEPVTSLRTQLDVGDIRYSLLPAIVEDAVGGSLDPARVPYGTTA ILQPYAGMSAGDRVQLIWQGPSPEASFRDALIVEFFAVGQPLVFGIAPEFIAPHFGGEVVIRYRIEQKSGAIHESGVTRV SIAPLVRGELPAPQVLEADDGVLNVTDAIDGVSVLISDARVEEGELVYLKCDGESFFHRDDREIISGMAMQSLVFIVPYR FWREHVNTVVRLSYSVERLDDVSQQSEVMLLQVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38617; Mature: 38617
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGEGIRSPGLCRERGRALPLPAPALDSITGAVIDPSLSRVVVRIAPWPGMACGDRVVLS CCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCEECCCCEEEEEEEECCCCCCCCCEEEEE WHGLDIQGLPYRHDISRSVSEGQLGKDIVLIVRDAHIAALDGGTLEVFWTLTSVTRSEPV EECCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEEEECCCEEEEEEEEEHHHCCCCH TSLRTQLDVGDIRYSLLPAIVEDAVGGSLDPARVPYGTTAILQPYAGMSAGDRVQLIWQG HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCCCEEEEEECC PSPEASFRDALIVEFFAVGQPLVFGIAPEFIAPHFGGEVVIRYRIEQKSGAIHESGVTRV CCCCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEEEEEEECCCCCEECCCCCEE SIAPLVRGELPAPQVLEADDGVLNVTDAIDGVSVLISDARVEEGELVYLKCDGESFFHRD EECHHHCCCCCCCCEEECCCCEEEEHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHCCC DREIISGMAMQSLVFIVPYRFWREHVNTVVRLSYSVERLDDVSQQSEVMLLQVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure MDGEGIRSPGLCRERGRALPLPAPALDSITGAVIDPSLSRVVVRIAPWPGMACGDRVVLS CCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCEECCCCEEEEEEEECCCCCCCCCEEEEE WHGLDIQGLPYRHDISRSVSEGQLGKDIVLIVRDAHIAALDGGTLEVFWTLTSVTRSEPV EECCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCEEEEECCCEEEEEEEEEHHHCCCCH TSLRTQLDVGDIRYSLLPAIVEDAVGGSLDPARVPYGTTAILQPYAGMSAGDRVQLIWQG HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECCCCCCCCCCEEEEEECC PSPEASFRDALIVEFFAVGQPLVFGIAPEFIAPHFGGEVVIRYRIEQKSGAIHESGVTRV CCCCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEEEEEEECCCCCEECCCCCEE SIAPLVRGELPAPQVLEADDGVLNVTDAIDGVSVLISDARVEEGELVYLKCDGESFFHRD EECHHHCCCCCCCCEEECCCCEEEEHHHHCCCEEEEECCCCCCCCEEEEEECCCHHHCCC DREIISGMAMQSLVFIVPYRFWREHVNTVVRLSYSVERLDDVSQQSEVMLLQVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA