| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459283
Identifier: 77459283
GI number: 77459283
Start: 3503435
End: 3503725
Strand: Direct
Name: 77459283
Synonym: Pfl01_3061
Alternate gene names: NA
Gene position: 3503435-3503725 (Clockwise)
Preceding gene: 77459281
Following gene: 77459284
Centisome position: 54.41
GC content: 53.61
Gene sequence:
>291_bases ATGGCAACTAGAAACGTTGTGCTCACCCCTCACCAGGAACAGGTTATTCATGACTTAGTTCATTCTGGCCGTTATCAGAA TGCCAGCGAAGTGATGCGAGAAGGTTTGCGTTTACTGGAGCAGCGCGTCGCCGAAGACACTGCCAAAATTGAAGCCCTGC GTCAGGCGACCTCGATTGGCATCATGGATCTTGAACACAGGCGCTTTACTCAGGTGAACGAAGGGGATCTGGAGCACTAC CTCGAGGGCTTGAGCCTGGAGGCAACCCTCCCCGCGAGAGAGAAACACTGA
Upstream 100 bases:
>100_bases CATCCCGTCAGATTAAAATCTCAAAGAATGTGCTCGTAAGCAAAATGGCATAATATGCCAACGGCCGGAAGAAACTGTTT ACCGAAAGCTGGAGCTCATT
Downstream 100 bases:
>100_bases GCATGCCGCAGTATCGGATTTCCAACGCGGCGCGCGTCGACATTGTCGACATCCTCAGGCTCTCCCAGACGCAGTTCGGC GATCAAGCACGCCAGCGCTA
Product: transcription regulator
Products: NA
Alternate protein names: Addiction Module Antidote Protein CopG/Arc/MetJ Family; Addiction Module Antidote Protein; Transcriptional Regulators
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MATRNVVLTPHQEQVIHDLVHSGRYQNASEVMREGLRLLEQRVAEDTAKIEALRQATSIGIMDLEHRRFTQVNEGDLEHY LEGLSLEATLPAREKH
Sequences:
>Translated_96_residues MATRNVVLTPHQEQVIHDLVHSGRYQNASEVMREGLRLLEQRVAEDTAKIEALRQATSIGIMDLEHRRFTQVNEGDLEHY LEGLSLEATLPAREKH >Mature_95_residues ATRNVVLTPHQEQVIHDLVHSGRYQNASEVMREGLRLLEQRVAEDTAKIEALRQATSIGIMDLEHRRFTQVNEGDLEHYL EGLSLEATLPAREKH
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10999; Mature: 10867
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRNVVLTPHQEQVIHDLVHSGRYQNASEVMREGLRLLEQRVAEDTAKIEALRQATSIG CCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IMDLEHRRFTQVNEGDLEHYLEGLSLEATLPAREKH CCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ATRNVVLTPHQEQVIHDLVHSGRYQNASEVMREGLRLLEQRVAEDTAKIEALRQATSIG CCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IMDLEHRRFTQVNEGDLEHYLEGLSLEATLPAREKH CCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA