| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459282
Identifier: 77459282
GI number: 77459282
Start: 3501733
End: 3502629
Strand: Reverse
Name: 77459282
Synonym: Pfl01_3060
Alternate gene names: NA
Gene position: 3502629-3501733 (Counterclockwise)
Preceding gene: 77459285
Following gene: 77459279
Centisome position: 54.4
GC content: 57.3
Gene sequence:
>897_bases ATGATCCGCATGCTGATCGTGGGCTATTGCTACGGCATCCGCTCAGAGCGGCGGTTGTGCGAAGAGGCCCATTTGAACCT GGCGTATTGTTGGTTCTGCCGGTTAAGCCTTGAAGATAAAGTCCCCAACCACGCGACTTTTTCCAAAAATAGACACGGCC GTTTTCGGGACAGCTATCTCTTTCGCTGGCTGTTCAATGAAGTGCTGCGTCATTGCATGGACGCAGGCTTGGTCAAAGGT GAAGGCTTTGCCGTGGACGCCAGCATCATCAAAGCGGATGCCAGTCGGCAGCGCGGTGTACCGGGTGATGAACCGGTCAA CTGGAGCGATCCGGCCCTGAGCACCCGCGCCGTGCGTGAGTATCTTGAGGCCCTCGATGAAGAGGCTCTGGCCGAAACGC TACCGAAGCGCCTATCGCTGACTGCCCGCTGGACCGCAGCTCCAGGTGGCCCAGCGTTCTACGCTTACTCCACGAATTAT CTGATCGATACCGAGCACGGCGTGATCATGGATGTGGAACCCACACCGGCTCACCGAACCGCAGAAGTCGAGAGCACCAC ATCGGCGACACCGCTTACGGTACCGCGCCGATGCTTGCCCGGATGGTGGAGGAAAAATACATCGGGCCACATGTGCCGGT GTGGGACAAAACTGAGCGCAAGAACGACAGCTTTTCGAGTAACGATTTCAACTGGAATGAAGAGGCCGAGGAATATCGCT GCCCAGCCGGCAACGTATTACGCAGCGAATGGCGAGCCTTCAGAACGAGCGTTCGCACGTCACCAAAGTCAACACCATCA TCTTCCGCTCCAGGCAGACCGACTGCGCGACATGTCCGATGAAAGCCAAGTGTTGCCCGAACACTCCGATTCGCAAGATC GTCCGCAGCGTCCATGA
Upstream 100 bases:
>100_bases TCTGCGCAGCATTGATCGGTGTCTCAATCTGAGCGATCTGCGCCATTACCTCGCCGATTTCTATAGCCCAATCGGGCGTC CGTCGATTGATCCTGAACTG
Downstream 100 bases:
>100_bases AGCCGCTCGTGATGTGGCTCGACGCATCGCAGCGACGCCGGAGTACGTGCGCTCTCGCCACGAACGTAAGAAGGTCGAAA TGTTGTTTGCCCACCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; ISPsy22 Transposase Truncated; IS5 Family Transposase N-Terminal Domain Protein; Transposase IS4 Family; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase For IS; Transposase-Related Protein; IS4 Family Transposase; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; ISSag8 Transposase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIRMLIVGYCYGIRSERRLCEEAHLNLAYCWFCRLSLEDKVPNHATFSKNRHGRFRDSYLFRWLFNEVLRHCMDAGLVKG EGFAVDASIIKADASRQRGVPGDEPVNWSDPALSTRAVREYLEALDEEALAETLPKRLSLTARWTAAPGGPAFYAYSTNY LIDTEHGVIMDVEPTPAHRTAEVESTTSATPLTVPRRCLPGWWRKNTSGHMCRCGTKLSARTTAFRVTISTGMKRPRNIA AQPATYYAANGEPSERAFARHQSQHHHLPLQADRLRDMSDESQVLPEHSDSQDRPQRP
Sequences:
>Translated_298_residues MIRMLIVGYCYGIRSERRLCEEAHLNLAYCWFCRLSLEDKVPNHATFSKNRHGRFRDSYLFRWLFNEVLRHCMDAGLVKG EGFAVDASIIKADASRQRGVPGDEPVNWSDPALSTRAVREYLEALDEEALAETLPKRLSLTARWTAAPGGPAFYAYSTNY LIDTEHGVIMDVEPTPAHRTAEVESTTSATPLTVPRRCLPGWWRKNTSGHMCRCGTKLSARTTAFRVTISTGMKRPRNIA AQPATYYAANGEPSERAFARHQSQHHHLPLQADRLRDMSDESQVLPEHSDSQDRPQRP >Mature_298_residues MIRMLIVGYCYGIRSERRLCEEAHLNLAYCWFCRLSLEDKVPNHATFSKNRHGRFRDSYLFRWLFNEVLRHCMDAGLVKG EGFAVDASIIKADASRQRGVPGDEPVNWSDPALSTRAVREYLEALDEEALAETLPKRLSLTARWTAAPGGPAFYAYSTNY LIDTEHGVIMDVEPTPAHRTAEVESTTSATPLTVPRRCLPGWWRKNTSGHMCRCGTKLSARTTAFRVTISTGMKRPRNIA AQPATYYAANGEPSERAFARHQSQHHHLPLQADRLRDMSDESQVLPEHSDSQDRPQRP
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33756; Mature: 33756
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRMLIVGYCYGIRSERRLCEEAHLNLAYCWFCRLSLEDKVPNHATFSKNRHGRFRDSYL CEEEEEEEHHHCCCHHHHHHHHHCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHH FRWLFNEVLRHCMDAGLVKGEGFAVDASIIKADASRQRGVPGDEPVNWSDPALSTRAVRE HHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHH YLEALDEEALAETLPKRLSLTARWTAAPGGPAFYAYSTNYLIDTEHGVIMDVEPTPAHRT HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCC AEVESTTSATPLTVPRRCLPGWWRKNTSGHMCRCGTKLSARTTAFRVTISTGMKRPRNIA CCCCCCCCCCCCCCCHHHCCHHHCCCCCCCEEECCCCCCCCEEEEEEEHHHCCCCCCCCC AQPATYYAANGEPSERAFARHQSQHHHLPLQADRLRDMSDESQVLPEHSDSQDRPQRP CCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIRMLIVGYCYGIRSERRLCEEAHLNLAYCWFCRLSLEDKVPNHATFSKNRHGRFRDSYL CEEEEEEEHHHCCCHHHHHHHHHCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHH FRWLFNEVLRHCMDAGLVKGEGFAVDASIIKADASRQRGVPGDEPVNWSDPALSTRAVRE HHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHH YLEALDEEALAETLPKRLSLTARWTAAPGGPAFYAYSTNYLIDTEHGVIMDVEPTPAHRT HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCC AEVESTTSATPLTVPRRCLPGWWRKNTSGHMCRCGTKLSARTTAFRVTISTGMKRPRNIA CCCCCCCCCCCCCCCHHHCCHHHCCCCCCCEEECCCCCCCCEEEEEEEHHHCCCCCCCCC AQPATYYAANGEPSERAFARHQSQHHHLPLQADRLRDMSDESQVLPEHSDSQDRPQRP CCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA