| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459269
Identifier: 77459269
GI number: 77459269
Start: 3488690
End: 3489256
Strand: Direct
Name: 77459269
Synonym: Pfl01_3047
Alternate gene names: NA
Gene position: 3488690-3489256 (Clockwise)
Preceding gene: 77459267
Following gene: 77459270
Centisome position: 54.19
GC content: 61.02
Gene sequence:
>567_bases ATGTCTCACGTCTTTGAAGGCTTGGCCACCGTTACCGTGATGGCTCGCTACGCGGGGAAGCCACAAGCCGAGTTGACGAC ACTTGAATGTCCGGTACGGTTGAAAACGGCCGGCACGGATCGCGCCCGCGTCGAACTCGCGCGCTATTTGGAAGGCCCCA AGGATGCCAACGTGTTGCGGGTGATCCTGCCAGAAGGGCGGATGGTGCAAGGCCCGATCGTTGATGGCTGCAACGCACCG CTGGGCGGCTGGTTGCTGATCGACGTCGAACCCGGCGATCTGGAGTTTGCGCCGCCGGCGGCCGAGCCCAATTCGCAAAC AGATAACCCTGAGCAAGAGTTGGCCGCGCTAGATCTACCACAGGCTGTGCAAAGTACAACCCTGAAACTCCTGCAGCAGA TTGCCCTGGCGCACACGGCGGACGATCTGTTCCGCGCCAGTGATCGCGCCGAAGGTTTTGTCCTGGGACTGGAGACGGTC GAGGCGTTGGACGCGGTGCGCATTATGGCGTTGTATGAGGTCTTCGACAGTGCTGCCACGGCGCAGCGTCAGGAATACGA ACAGTGA
Upstream 100 bases:
>100_bases GTCGTGGCCGTTGAAACCAGGCCTCCGAAGGCTGGTCTACCATTAAGGCACCCTCTGGTTTTCTCCTCCACGGCTACTGA CTCGCTTCGGAACCCGACTC
Downstream 100 bases:
>100_bases TCGGTGAAGGCATTCACGAAGAAGTGTTACGCGCGTTGGTCGAACAACACGCAGTGCGCGAATGCCTATTGGCCAGAATC GATGGCGGCCCGGACTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSHVFEGLATVTVMARYAGKPQAELTTLECPVRLKTAGTDRARVELARYLEGPKDANVLRVILPEGRMVQGPIVDGCNAP LGGWLLIDVEPGDLEFAPPAAEPNSQTDNPEQELAALDLPQAVQSTTLKLLQQIALAHTADDLFRASDRAEGFVLGLETV EALDAVRIMALYEVFDSAATAQRQEYEQ
Sequences:
>Translated_188_residues MSHVFEGLATVTVMARYAGKPQAELTTLECPVRLKTAGTDRARVELARYLEGPKDANVLRVILPEGRMVQGPIVDGCNAP LGGWLLIDVEPGDLEFAPPAAEPNSQTDNPEQELAALDLPQAVQSTTLKLLQQIALAHTADDLFRASDRAEGFVLGLETV EALDAVRIMALYEVFDSAATAQRQEYEQ >Mature_187_residues SHVFEGLATVTVMARYAGKPQAELTTLECPVRLKTAGTDRARVELARYLEGPKDANVLRVILPEGRMVQGPIVDGCNAPL GGWLLIDVEPGDLEFAPPAAEPNSQTDNPEQELAALDLPQAVQSTTLKLLQQIALAHTADDLFRASDRAEGFVLGLETVE ALDAVRIMALYEVFDSAATAQRQEYEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20386; Mature: 20255
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVFEGLATVTVMARYAGKPQAELTTLECPVRLKTAGTDRARVELARYLEGPKDANVLR CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCCEEE VILPEGRMVQGPIVDGCNAPLGGWLLIDVEPGDLEFAPPAAEPNSQTDNPEQELAALDLP EEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCH QAVQSTTLKLLQQIALAHTADDLFRASDRAEGFVLGLETVEALDAVRIMALYEVFDSAAT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AQRQEYEQ HHHHHCCC >Mature Secondary Structure SHVFEGLATVTVMARYAGKPQAELTTLECPVRLKTAGTDRARVELARYLEGPKDANVLR CHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCCEEE VILPEGRMVQGPIVDGCNAPLGGWLLIDVEPGDLEFAPPAAEPNSQTDNPEQELAALDLP EEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCH QAVQSTTLKLLQQIALAHTADDLFRASDRAEGFVLGLETVEALDAVRIMALYEVFDSAAT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AQRQEYEQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA