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The map label for this gene is rcsB [H]

Identifier: 77459263

GI number: 77459263

Start: 3482296

End: 3482943

Strand: Direct

Name: rcsB [H]

Synonym: Pfl01_3041

Alternate gene names: 77459263

Gene position: 3482296-3482943 (Clockwise)

Preceding gene: 77459262

Following gene: 77459264

Centisome position: 54.09

GC content: 53.55

Gene sequence:

>648_bases
ATGGAAACCTTCAACGTTGTCATCGCCGATGATCACCCTATCGTCCTGCTGGGGGTGCGGGAACTGGTCGAGCGTGACCG
CCGCTTCAGCGTAGTGGGCGAAGCCGTTTGCCCCGATGAGCTGATCGACTTGCTGACGACCTGGCCGGTAGACCTGTTGA
TCACCGATTTCAACATGCCCGGTGACTCGCGCTACGGTGACGGGCTGAAACTGGTGGAATACGTGACCCGGCATTTCCCT
CAGGTGCGGGTGCTGGTTCTGACCATGATTTCCAACCCGTTGATCCTGACCCGTCTGCAGGAACTCGGTGTACTGTCGGT
GATTCAGAAAAACCAGTTGCACGTTGAAATAGAAGTGGCGCTCAAAGCCATTGCCAAAGGCAATACGGTTCGCAGCAAAC
AACCCGCACCCACTTCGGTACTGGACAATAGCGCTGACCTCGATGAACGTTTTGCTCGTCTGTCGCCCAAGGAACATGAA
ATCCTGCGCTTGTTTGTGCAAGGACAAGGCGTCAATGAAATAGCCCGCGGACTTAACCGAAGTGCCAAGACAATCAGTAC
GCAGAAAGTTTCCGCCATGCGCAAACTTGAAGTAAACAGCGATCAGGAGTTACTGGCTTATTGTATAGAGCGCAACTTGT
TCAACTAG

Upstream 100 bases:

>100_bases
GCCGTCACCCCGGCGCTGGCCGTGGAGGTGCGTCAACAACTGGCGCGCCTGAGCGACCTGCTCGACGCCCTTGAATAATT
TCACTCTGGATAAAGCACCC

Downstream 100 bases:

>100_bases
ACAATTGCGCACTTCAGCATGACTTTCCGCGCATCTAGGAATCGTCTGATGTTCCAGCGCAAGTACGCGATTTATTGTGT
TGCTTTAACCCCACCAATGG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPVDLLITDFNMPGDSRYGDGLKLVEYVTRHFP
QVRVLVLTMISNPLILTRLQELGVLSVIQKNQLHVEIEVALKAIAKGNTVRSKQPAPTSVLDNSADLDERFARLSPKEHE
ILRLFVQGQGVNEIARGLNRSAKTISTQKVSAMRKLEVNSDQELLAYCIERNLFN

Sequences:

>Translated_215_residues
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPVDLLITDFNMPGDSRYGDGLKLVEYVTRHFP
QVRVLVLTMISNPLILTRLQELGVLSVIQKNQLHVEIEVALKAIAKGNTVRSKQPAPTSVLDNSADLDERFARLSPKEHE
ILRLFVQGQGVNEIARGLNRSAKTISTQKVSAMRKLEVNSDQELLAYCIERNLFN
>Mature_215_residues
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPVDLLITDFNMPGDSRYGDGLKLVEYVTRHFP
QVRVLVLTMISNPLILTRLQELGVLSVIQKNQLHVEIEVALKAIAKGNTVRSKQPAPTSVLDNSADLDERFARLSPKEHE
ILRLFVQGQGVNEIARGLNRSAKTISTQKVSAMRKLEVNSDQELLAYCIERNLFN

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=211, Percent_Identity=45.4976303317536, Blast_Score=163, Evalue=9e-42,
Organism=Escherichia coli, GI1788222, Length=214, Percent_Identity=28.0373831775701, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=28.5024154589372, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=29.6116504854369, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24213; Mature: 24213

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPVDLLITDFNMP
CCCEEEEEECCCCEEEEEHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCC
GDSRYGDGLKLVEYVTRHFPQVRVLVLTMISNPLILTRLQELGVLSVIQKNQLHVEIEVA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHH
LKAIAKGNTVRSKQPAPTSVLDNSADLDERFARLSPKEHEILRLFVQGQGVNEIARGLNR
HHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCC
SAKTISTQKVSAMRKLEVNSDQELLAYCIERNLFN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
METFNVVIADDHPIVLLGVRELVERDRRFSVVGEAVCPDELIDLLTTWPVDLLITDFNMP
CCCEEEEEECCCCEEEEEHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCC
GDSRYGDGLKLVEYVTRHFPQVRVLVLTMISNPLILTRLQELGVLSVIQKNQLHVEIEVA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEHHHH
LKAIAKGNTVRSKQPAPTSVLDNSADLDERFARLSPKEHEILRLFVQGQGVNEIARGLNR
HHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCC
SAKTISTQKVSAMRKLEVNSDQELLAYCIERNLFN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]