| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459251
Identifier: 77459251
GI number: 77459251
Start: 3465587
End: 3467131
Strand: Direct
Name: 77459251
Synonym: Pfl01_3029
Alternate gene names: NA
Gene position: 3465587-3467131 (Clockwise)
Preceding gene: 77459250
Following gene: 77459254
Centisome position: 53.83
GC content: 58.77
Gene sequence:
>1545_bases ATGCTCATGAGCACCAACAGCTACCTGGAATTTTACCTCTCCCTGCTGGCCTGGATCATCAACAACGGCCTCTGGAGCGT CCTGTCCGATACTGGGCTGTTTGCCGCGCCCTTCGGTGCAATCATCTTGCAGGAATGGTTGTCTGCTCGTCAGCAAGGCG CGGATGAAGGCAACAAGGGACTGCTCTCGGTGCCACGGATCGAGAACCGGTTGTGGCTGGCCTACATCGTCGTCTTGTTC GGTTGCGCCCCCGTCTTTCCGTTGAGTCTTGCATCAATGGCGTTCGACGATGCGGCGAGCCAGCGCTGCGGCGTGAGTGT GGCCAAGCCTGCGGAAACCGCCTGGGGGACGACCTTCAATACCATCGGCGAACGCTCTGCCAACGTGCCGATCTGGTGGT TTCTGGTGCATGCCTTGAGCAAAGGTGTGACTGCGGCGGCCACCGCCTCCATCCCTTGCGCACCGGATATCCGGCAAATG CGCATGGAGATCGACAGCTCGCGCATCGACAGTCAGGTGCTGCTGCAGGAAGTCGCCGACTTCACTCGCGACTGCTACGG CTATTCCCGTTCTCGGTTGTTTACCAATCGCCCGCAACTGGACAAGTCACAAAGTCACGACGCATCCTGGATCGGCTCAA GCTATTTTCTCGACACACCCGGCTACTACGACACCGATCGCTCACGAACGCCGCGAGTCAGTTGGCCGTATGACGACAAC CGCGATGTTTCCCTGCCGCGGCTGGAGAATGGCGCGGGCTACCCCACTTGCAAACAGTGGTGGAGCGACAGCGGTGTCGG GTTGCGCGAGCGCTTGATCGAGCAAGTCGATCCTTCGCTGCTAACTCAGCTAAAAGGTTGGTTGACTGGCCGATCGAGCA ACGAGATCGAGGATGCCACCCTGCGTGAGCTGGTCAGTCCGCGCCAGCAATCGATGACCATGTCGCCCGGACAGGTGTAC CAGGACTATGGCTCCAGCGCCCGTGGCGGCTCGATCAATCAGGGGCTCAATAATCTGGCCACCAATACCGGGTTAGCACT GGGCTCCTTCAGCAACTTCCCGGCGCTGAATGCGCTACGCGCCGCCCTACCGATGGTGCAGGCGTTCCTGATCATGGGCA TCATCATCAGCTTGCCGCTGATTCTATTGGTCAGTACCTACCAGTTGAAGACCGTCATGACGGTGACGTTCGCACTGTTC ACACTGCATATGCTGAGCTTCTGGTGGGAACTGGCCCGCTGGGTCGACTCCAGCATGCTCGATACCTTGTACAACCAGGT TTCGGCGTCCAATCAGATGCTGTTGTCGCTGCCCACATCCGGACTTATGGATGGGACGGTCACCGCGCAGGTGATCGAGT ACGTGATGGGGGCAATGTTCGTCGTGCTTCCGATGTTGTTTTTGGCTGCAATGAGCTGGGCAGGATATAGCGTTGGCTCA ATTGCCGACGGCATGCTTAGCAAAGGAGCAGCTCAAGCGCAGGACGCTGGTGCAAGGGGCGCTGGAGCTCTGATGTCTGC TGGAAAGGCCTTAAGGAAGGGGTGA
Upstream 100 bases:
>100_bases CGACATCGACCACAGGATCGACTGCGCGTGAAACGCATCGGGACATTAGGGCTCGTGCTCTTTACCTACGTCGAACTCAC CCGACTGTGAGGTCACCACC
Downstream 100 bases:
>100_bases AGAACTCGACTACAGGTCTTTTAAATCAGGCTGACCGGGCGCGCGGCCATACTCATACTCACCATATGGGTCGCCATATG CCTTGTACCGGAGAGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKGLLSVPRIENRLWLAYIVVLF GCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFNTIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQM RMEIDSSRIDSQVLLQEVADFTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDATLRELVSPRQQSMTMSPGQVY QDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALRAALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALF TLHMLSFWWELARWVDSSMLDTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG
Sequences:
>Translated_514_residues MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKGLLSVPRIENRLWLAYIVVLF GCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFNTIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQM RMEIDSSRIDSQVLLQEVADFTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDATLRELVSPRQQSMTMSPGQVY QDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALRAALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALF TLHMLSFWWELARWVDSSMLDTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG >Mature_514_residues MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKGLLSVPRIENRLWLAYIVVLF GCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFNTIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQM RMEIDSSRIDSQVLLQEVADFTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDATLRELVSPRQQSMTMSPGQVY QDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALRAALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALF TLHMLSFWWELARWVDSSMLDTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56211; Mature: 56211
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC LLSVPRIENRLWLAYIVVLFGCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFN CEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH TIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQMRMEIDSSRIDSQVLLQEVAD HHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN HHHHHHCCHHHHHCCCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCC RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDAT CCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHH LRELVSPRQQSMTMSPGQVYQDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALR HHHHHCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHH AALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALFTLHMLSFWWELARWVDSSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC LLSVPRIENRLWLAYIVVLFGCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFN CEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH TIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQMRMEIDSSRIDSQVLLQEVAD HHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN HHHHHHCCHHHHHCCCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCC RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDAT CCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHH LRELVSPRQQSMTMSPGQVYQDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALR HHHHHCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHH AALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALFTLHMLSFWWELARWVDSSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA