| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459249
Identifier: 77459249
GI number: 77459249
Start: 3463882
End: 3465264
Strand: Direct
Name: 77459249
Synonym: Pfl01_3027
Alternate gene names: NA
Gene position: 3463882-3465264 (Clockwise)
Preceding gene: 77459248
Following gene: 77459250
Centisome position: 53.8
GC content: 61.82
Gene sequence:
>1383_bases ATGAGTCGGCTTCTCGCACGACCATGGTTGGGCGCGATGAGTCTGTTGCTCTGTGGACTGCTCGCCATGGCTACTCATGC CCACGCAGCCGAGGGCGATTACCGCCTGGGCACTCAAGGCGAAGTACTCGACGACCGAGTGATGTACACCATTGGTGGCG GCTCGACAGTCGGCTCACCGAGTTCGCTCTACCGACCCAGCGGTCTCGGTGTCGGCGGGTCCTGGCGCGCGAACATGATG TGCGGAAACATGAGCCTCACCAACACCCTGCAAAACCAGCTGAACGGCGTCACCGAAGGTTTCCAGCAGATCATGGGCAG CATCGTGCAGAACGCGACCCAAGCGGTGATGTCGCTGCCGGCGTTGATCATCCAGCGCGCCAACCCCGGTCTCTATGAGT TGCTCAGTAACGGGGTGATGCAGGGGCGCATCGACTTCGATCGTTCCAAGCTGACCTGCCAGGCCATGGCAGAGAAGATG GCGGACAAAGTTGGTCAAGCCGGTTGGGGTGCGCTGGCCAAAAACCAGGAGATGCAGGTCAATCTGGAGCAAACCGGCGG TGATGCGGTGGCAGCGGTGAAAAACACCGAGGCCCATAACGGCAACAATGGGGTGTCCTGGGTCGGCGGTTCGAAGGCCG GAGGGAACGGACAGACGCCCATTCGAGTGACCGCCGACGTGGTCCGTGCAGGCTATAACCTGCTGCATAACCGGTCGGTG GATGACAGCGCCTCGATCAGTAGCAGCGACTGCTTAGGCGGGGCTATTTGCCAGACATGGACCTCGCCCCAAGAGGAATC CGAATGGGCCGTTCGGGTGTTGGGCGAGACCGAAGTCGCGACCTGCGACACATGCGAAACCCTGCGTGCTACCGCTGGCA GTGGATTGACGCCGTTGATTCAGGAGGCCTATAGCGAACGCCTGAAGGCCCTGCAGGAGTTGCTGTCTGGCTCTCTCCCG CCTACCCCTGACAACCTGGCTAAAGCCTCCAGCCCGATGTTACCGGTGACCCGAGGCGTGGTCGAAGCCCTGCGTGACGA TCCCGACCAGGATCTGCTGGCACGGCGTTTGGCCAGTGAGACTGCCCTGTCCAGCGTACTCGACAAGGCGTTGCTGCTAC TGCGTACGCTACTGGCGGGCAGTCACGAACCGAACATCGCCTCCGCCGAACCGGCCCAGATCGCCTTGACGAAAAACATC GACGCCTTGGAGCGCGAAATTCGCCTGCTGCAGACCGAGCTGCAGGTCAGGCAGATGCTGACGACCAATACCGCCAGCCT GGTGCTCGACCGGCATGCCGGTGGCGCTGATGCTTCGCGCACCGTCGAGCAAGGCGACCCTGAGCCCGGTCGACTTAATG ATGCTGACACCAGGCGCAAGTGA
Upstream 100 bases:
>100_bases CGGATGGCGGCTACGCCTGGTCGCTATGGCGGCCCTATAGCTGCTGCAAACGCGAGGGGCAGACCTTCCTGTTCAGCATC GACTTCGAAGGCGGTGCTTC
Downstream 100 bases:
>100_bases GCCATGAAACGCTCACCACTATTCACTCTGTTTTCAGGTCTAGGGATTGCCGCGGTGATGATCCTCACCGCCGCACTGGT CGCCTGGATCGGCCGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSPSSLYRPSGLGVGGSWRANMM CGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKM ADKVGQAGWGALAKNQEMQVNLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSV DDSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLIQEAYSERLKALQELLSGSLP PTPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASETALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNI DALEREIRLLQTELQVRQMLTTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK
Sequences:
>Translated_460_residues MSRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSPSSLYRPSGLGVGGSWRANMM CGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKM ADKVGQAGWGALAKNQEMQVNLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSV DDSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLIQEAYSERLKALQELLSGSLP PTPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASETALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNI DALEREIRLLQTELQVRQMLTTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK >Mature_459_residues SRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSPSSLYRPSGLGVGGSWRANMMC GNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKMA DKVGQAGWGALAKNQEMQVNLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSVD DSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLIQEAYSERLKALQELLSGSLPP TPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASETALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNID ALEREIRLLQTELQVRQMLTTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48772; Mature: 48641
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSP CCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC SSLYRPSGLGVGGSWRANMMCGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLP HHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKMADKVGQAGWGALAKNQEMQV HHHHHCCCCCHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEE NLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSV EEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCC DDSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLI CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHH QEAYSERLKALQELLSGSLPPTPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASE HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH TALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNIDALEREIRLLQTELQVRQML HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH TTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK HCCHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSP CCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC SSLYRPSGLGVGGSWRANMMCGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLP HHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKMADKVGQAGWGALAKNQEMQV HHHHHCCCCCHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEE NLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSV EEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCC DDSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLI CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHH QEAYSERLKALQELLSGSLPPTPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASE HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH TALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNIDALEREIRLLQTELQVRQML HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH TTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK HCCHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA