| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459248
Identifier: 77459248
GI number: 77459248
Start: 3462929
End: 3463885
Strand: Direct
Name: 77459248
Synonym: Pfl01_3026
Alternate gene names: NA
Gene position: 3462929-3463885 (Clockwise)
Preceding gene: 77459247
Following gene: 77459249
Centisome position: 53.79
GC content: 60.92
Gene sequence:
>957_bases ATGCCTGTCGCCTGCTCGTCTATCCCACCCACAAAGCTAAGGCCCTTGGCGCTGAGCGTTCTTCTGATGTGCGGTCCAAG CATGGCGCTGGACACCGCCAGCATCACGTCCTCCGTGCTTTCTCCAAACTGTCTCGAATACAGGGTCGTCGGCATTTGTT TCTGGCTCCTCTGCACGCCCTTCGGCTGCAAGGTCAAAACCTCGACCAAGGTTCGTCATTTCATTCCTGAACTGGTGGTC TCGAGCTACGCCACCACCGGCAGCAATCCCTGGGGCGAGATGGCCACCCTCTCTTTCCCCATCAACGGTGCGGACGGTGG CGGCAACCTGATCACACCGAACACCCGCCGCGACAACCTGCCCCGCTTCAAGAACGTTGATGGCATCGGCCACCCCGGTG GCTGGATCGCAACGGAACTGGCTTCGCAATCAGGCTACGCCTGCGCCAGCGGCGCTACTGCGTTCATGCCCTACTACCTG AGCACCCTGGACTCACTGGCCTGGCGTCATGGCATTCCGGAAAGTCTCTATCCTGAGTCGCTCATGCCGGGGATCCGTGA AATTGGTCGTCAGGCTTCGGGAAGCATGTGGGGCAACGTCTATCCCCGCCAAGGCTTTCTGGTGCAGCCCGACGACTTCA AGGCGGCCGCGGTCATGGCGCAACGGGCCGGCGATGTGATTACCCGTAACGGACAGCCGCATGCGTATGTACCGCTCACA CCCACCCCACGCGACGGCTACTGGCCACCTGGTCCGATCGTTGAAAACGACGCTTCGACCCACAAATGGCAATTGCTCTC CCCTCAGATTCTGTCCACGTGCACCATCTTCCCCAGCGATCCGGTACCGAGCGCGGATGGCGGCTACGCCTGGTCGCTAT GGCGGCCCTATAGCTGCTGCAAACGCGAGGGGCAGACCTTCCTGTTCAGCATCGACTTCGAAGGCGGTGCTTCATGA
Upstream 100 bases:
>100_bases TCACGTTTCACAAACCCGATAGATCCGCCTTCATAATTTCCACTGACAGTCTTCCGTCCCTAACCGAACCTGCCCGGGCC ATACACCAAGAGCCTGGATC
Downstream 100 bases:
>100_bases GTCGGCTTCTCGCACGACCATGGTTGGGCGCGATGAGTCTGTTGCTCTGTGGACTGCTCGCCATGGCTACTCATGCCCAC GCAGCCGAGGGCGATTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPVACSSIPPTKLRPLALSVLLMCGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTSTKVRHFIPELVV SSYATTGSNPWGEMATLSFPINGADGGGNLITPNTRRDNLPRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYL STLDSLAWRHGIPESLYPESLMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHAYVPLT PTPRDGYWPPGPIVENDASTHKWQLLSPQILSTCTIFPSDPVPSADGGYAWSLWRPYSCCKREGQTFLFSIDFEGGAS
Sequences:
>Translated_318_residues MPVACSSIPPTKLRPLALSVLLMCGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTSTKVRHFIPELVV SSYATTGSNPWGEMATLSFPINGADGGGNLITPNTRRDNLPRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYL STLDSLAWRHGIPESLYPESLMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHAYVPLT PTPRDGYWPPGPIVENDASTHKWQLLSPQILSTCTIFPSDPVPSADGGYAWSLWRPYSCCKREGQTFLFSIDFEGGAS >Mature_317_residues PVACSSIPPTKLRPLALSVLLMCGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTPFGCKVKTSTKVRHFIPELVVS SYATTGSNPWGEMATLSFPINGADGGGNLITPNTRRDNLPRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYLS TLDSLAWRHGIPESLYPESLMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHAYVPLTP TPRDGYWPPGPIVENDASTHKWQLLSPQILSTCTIFPSDPVPSADGGYAWSLWRPYSCCKREGQTFLFSIDFEGGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34344; Mature: 34213
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVACSSIPPTKLRPLALSVLLMCGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTP CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC FGCKVKTSTKVRHFIPELVVSSYATTGSNPWGEMATLSFPINGADGGGNLITPNTRRDNL CCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCC PRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYLSTLDSLAWRHGIPESLYPES CCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH LMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHAYVPLT HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCCCEEEECC PTPRDGYWPPGPIVENDASTHKWQLLSPQILSTCTIFPSDPVPSADGGYAWSLWRPYSCC CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHEEEECCCCCCCCCCCCEEEECCCCHHHH KREGQTFLFSIDFEGGAS HHCCCEEEEEEECCCCCC >Mature Secondary Structure PVACSSIPPTKLRPLALSVLLMCGPSMALDTASITSSVLSPNCLEYRVVGICFWLLCTP CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC FGCKVKTSTKVRHFIPELVVSSYATTGSNPWGEMATLSFPINGADGGGNLITPNTRRDNL CCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCC PRFKNVDGIGHPGGWIATELASQSGYACASGATAFMPYYLSTLDSLAWRHGIPESLYPES CCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH LMPGIREIGRQASGSMWGNVYPRQGFLVQPDDFKAAAVMAQRAGDVITRNGQPHAYVPLT HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCCCEEEECC PTPRDGYWPPGPIVENDASTHKWQLLSPQILSTCTIFPSDPVPSADGGYAWSLWRPYSCC CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHEEEECCCCCCCCCCCCEEEECCCCHHHH KREGQTFLFSIDFEGGAS HHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA