Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459245

Identifier: 77459245

GI number: 77459245

Start: 3459347

End: 3462100

Strand: Direct

Name: 77459245

Synonym: Pfl01_3023

Alternate gene names: NA

Gene position: 3459347-3462100 (Clockwise)

Preceding gene: 77459244

Following gene: 77459247

Centisome position: 53.73

GC content: 60.64

Gene sequence:

>2754_bases
GTGCGTACCGGCGATTCGAGCAACCGCACTCCTGCGTGGAAAGCCTGGCGCAACCCATTGCGCCCTCGCGCCACCTTGGC
CGATGACGCCGCACTCTATACGCACAACCCCAGCTTCACCGATCACCTGCCTTGGGTCGAGTACCTCGACACCGAGCAAT
GTTTTCTGCTCGATGACAATCGTTCGGTGGGCGCGGTGTTCGAGTTACTGCCCATCGGCACCGAAGGGCGCGAACCCGAT
TGGCTGATGGCGGCCCGCGATGCCCTTGAGGATGCCCTGCAGGATAGCTTTGACGAGCTGGATCAAGCGCCTTGGGTAGC
GCAGTTTTTCTGCCAGGACGACAACGATTTAACCCCCTATCTGACCCGACTCAACGATTATATTCAGGACAGAGCGCGAG
GTACGGTGTTCACCGAAGCGTACCTGGAACTTACTCGCCGACATCTGAAGGCCATCGCCAAGCCGGGCGGTCTGTTCGAA
GACAACGCAGTCACGCGCCTACCCTGGCGCGGAAACAACCGCCGGGTGCGCTTGGTGGTTTATCGCTGGCTTGAGTCTGA
CGACGAGGAGACAGGACTCACCCCGGTGCAATCCCTGCATGAGGCTTGCGAACGTATCGCGGCTTCGTTGCAGGCCTGCG
GCGTACAATCGGTACGAGTCGATGGCCGCGGTCTTTATGCCTGGTTAGTGCCCTGGTTCAATCCGGCCCCCCAGCTCACC
GATGAAGCGCCCGAGGAGTTCTACCGCCGCGTGGCCTATCCGGAGTCAGGCGACGGTGAATCGCTGGAACTGCCCTTTGA
TCATGACTTTGCCGAGCGGCTGTTCTTCAATGAACCGCGTTCGGATGTGCAGCACGGACTCTGGTTTTTTGACGATCAGC
CCCACCGGGTCATGGTAGTGGACAAGCTGCGCCGAGCGCCCCTGATTGGTCAACTCACCGGAGAAACCCGCAAGGGCGAC
GCGGTGAATGCCCTGTTCGACCAGTTACCCGAGGGCACGGTGGTGAGCCTGACCCTGGTGGCCAAACCACAGGATGTACT
CGAAGACCAGTTGAACCGCTTGGCGCGAAAAGCCATCGGTGAAAATCTGGCCTCGACCCAGACCCGCCAAGATGTCGAAG
AGGCTCGTGCGATCATCGGTCGCCAGCACAAGCTGTACCGCGGCACGCTGGCGTTCTACGTGCGCGGTCACGATGAACTG
CAATTGCACCAGCGCTCGGTCAGCCTGGCTAACGCGCTGCTGGGTGCGGGGCTGCAACCGGTACGTGAAGGCGATGAAGT
CGCCGCCTGCAACAGCTACCTGCGTTGGTTACCGATGGCTTACAACCCGGCGCGCGACACGCGCAACTGGTACACCCGCC
TGATGTTTGCCCAGCACCTGGCGAATCTGGTTCCGGTGTGGGGCCGCAGCACCGGCACCGGCCACCCGGGCATCACCCTG
TTCAATCGGGGTGGTTCGCCGTTGAGTTTTGATCCGTTGTCACGTCTTGACCGGGCCATGAACGGCCATCTGCTGTTGTT
CGGCCCGACTGGCGCCGGCAAATCGGCCACCCTGGTCACCCTGCTGATGCAGGTCATGGCTGTGTACCGCCCTCGTCTGT
TTATCGTCGAGGCCGGCAACTCATTCGGCTTGCAGGGAGACTACTTCGCGACACAGGGCCTGTCGGTCAACAAGGTCCAA
TTGAAACCTGGCGCCTCGGTCAGTCTCGCCCCGTTCGCCGATGCTTGGCGCCTGGTCGAGCAGCCGGATCAGGTGGCGAG
TCTATCGATCGATGAGCTGGACGATGAGGTGGTAACCAGTCGCGAAGACCAGCGCGATGTTCTTGGCGAACTGGAAATCA
CCGCTCGGCTGATGATCACCGGCGGCGAGGCCAAGGAAGAGGCCCGCCTGAGTCGAGCTGATCGCAGCTTGATTCGCGAG
TGCATTCTCGATGCGGCGCAGACCTGTGTCGCAGCGAACCGCCAGGTGCTGACCCGCGACGTGCGCAACGCTTTGCTGCG
CGTCGCCGCCGACCTGCACTTACCGGAAAAACGTCGCGAACGTGCCCAGGAGATGGGCGAGTCCATCGACCTGTTTTGCC
AGGGTTTCGAAGGGGAACTGTTCGATCGCGAGGGCACGCCTTGGCCCGAGAGCGATGTGACCATTGTCGATCTCGCCACT
TACGTTCGCGAAGGCTACGAGGCGCAGATGTCCATCAGCTATATCAGCCTGATGAACACCGTGAACAACCTTGCCGAGCG
CGACCAGTATCTGGGCCGACCGATCATCATGGTCACCGACGAGGGCCATATCATCACCAAGAACCCGCTATTGACGCCAT
TTGTGGTCAAGGGGACGAAGATGTGGCGCAAGCTCGGCGCTTGGTTCTGGCTCGCCACGCAAAACCTTGCCGATTTTCCC
ACGGCGGCGCAGACCATGCTCAACATGATCGAATGGTGGATTTGTTTGAATATGCCGCCCGCGGAGATTGAGGAAATCGC
ACGGTTCAAGAAGCTCACGCCGGCGCAGAAAGCCTTGTTGCTCTCCGCCAGTAAGGAGCCGGGGAAGTACACTGAGGGGG
TCGTGCTGTCGAAGAAGCTCGAGACACTGTTTCGAGCCGTGCCACCCAGCCTTTACCTCGCCCTGGCCATGACCGAGCCC
GAGGAAAAAGCCGAGCGTTGGACGCTGATGCAGGAGAACGGCTGCTCAGAACTGGAAGCGGCGTATAGGGTAGCTGAACG
GATCGATAGAGCGCGAGGAATAGAACCCGCATAG

Upstream 100 bases:

>100_bases
GTGGTACTGAGCAAGCACCGGTCCCGGGTTACTCGACCGTATTTCCGTTCTACCAACGGGTGCAGTACGCATTACCGGGT
GAACGTCAGGAAGACTTGTA

Downstream 100 bases:

>100_bases
GGGAATCTATTGAGACCTCTCGCTCTAACGCGAGTGACCGGTTATTGCGGTACGCCCCGGAGCCGCTGCTGAATCCTCAA
CAGGAATCCGGCTTCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 917; Mature: 917

Protein sequence:

>917_residues
MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD
WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE
DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT
DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD
AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL
QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL
FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ
LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE
CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT
YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP
TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP
EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA

Sequences:

>Translated_917_residues
MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD
WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE
DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT
DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD
AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL
QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL
FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ
LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE
CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT
YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP
TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP
EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA
>Mature_917_residues
MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD
WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE
DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT
DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD
AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL
QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL
FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ
LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE
CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT
YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP
TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP
EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103402; Mature: 103402

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDN
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEECC
RSVGAVFELLPIGTEGREPDWLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPY
CCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHH
LTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFEDNAVTRLPWRGNNRRVRLVV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEE
YRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCC
DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVV
CCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHCCCEEECCCCCEEEEE
DKLRRAPLIGQLTGETRKGDAVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIG
HHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
ENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDELQLHQRSVSLANALLGAGLQP
CHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
VREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGN
ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
SFGLQGDYFATQGLSVNKVQLKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTS
CCCCCCCCEEECCCCEEEEEECCCCCEEECCHHHHHHHHCCCHHHHHCCHHHCCHHHHHC
REDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRECILDAAQTCVAANRQVLTRD
CCHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCCCEEHHHHHH
YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEHHHH
MWRKLGAWFWLATQNLADFPTAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALL
HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
LSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEPEEKAERWTLMQENGCSELEA
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHH
AYRVAERIDRARGIEPA
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDN
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEECC
RSVGAVFELLPIGTEGREPDWLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPY
CCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHH
LTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFEDNAVTRLPWRGNNRRVRLVV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEE
YRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCC
DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVV
CCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHCCCEEECCCCCEEEEE
DKLRRAPLIGQLTGETRKGDAVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIG
HHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
ENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDELQLHQRSVSLANALLGAGLQP
CHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
VREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGN
ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
SFGLQGDYFATQGLSVNKVQLKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTS
CCCCCCCCEEECCCCEEEEEECCCCCEEECCHHHHHHHHCCCHHHHHCCHHHCCHHHHHC
REDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRECILDAAQTCVAANRQVLTRD
CCHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCCCEEHHHHHH
YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEHHHH
MWRKLGAWFWLATQNLADFPTAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALL
HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
LSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEPEEKAERWTLMQENGCSELEA
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHH
AYRVAERIDRARGIEPA
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA