| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459239
Identifier: 77459239
GI number: 77459239
Start: 3455222
End: 3455593
Strand: Direct
Name: 77459239
Synonym: Pfl01_3017
Alternate gene names: NA
Gene position: 3455222-3455593 (Clockwise)
Preceding gene: 77459238
Following gene: 77459240
Centisome position: 53.67
GC content: 56.99
Gene sequence:
>372_bases ATGTTCAAGTGCCTTATCCCCCTAAAAAACAACCTGCGTGATCGTGCCAGTCAGCGCCTGATCGGTCTGCTGTTGGTACT CGGTCCAAGCCTGGCTTTTGCCGAACTCCCAACCATGGAAGCGCCTTCACGTGGTGAAGGTTCCGGGTTGATCGAGACGA TCAAAAACTACGCCTACGACGGCGGTATCCTGCTCGGCTTGCTGATCGCCCTGCTCGCTTTCTTGGGTGTGGCGTGGCAT TCCCTGACCGTATATGCCGACGTGCAGAACCAGCGCAAGACCTGGAAAGACCTCGGTGCCGTGGTTGGCATCGGCGCCCT ACTGGTGGTGATCATCATCTGGTTTCTCACCAAGGCCGCCGCGATTTTGTGA
Upstream 100 bases:
>100_bases GTGTGCGCTTCGGCGCGTTTGGCGGCAGCGCCGCGCGCGTGCTGCTCGCATTGTTGGTCCTGATGTTCTTCACCCTGTCC TAACCCAGGAGATCGCCATC
Downstream 100 bases:
>100_bases GGTTGGCATGAACGACACTATCGAACGCGTTGCCGACGGCACCTTGGTCTTTCTGCCCGAGCGACTCAATCGTGATCCCG CCGTATTACGCGGTTTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MFKCLIPLKNNLRDRASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYDGGILLGLLIALLAFLGVAWH SLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAAAIL
Sequences:
>Translated_123_residues MFKCLIPLKNNLRDRASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYDGGILLGLLIALLAFLGVAWH SLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAAAIL >Mature_123_residues MFKCLIPLKNNLRDRASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYDGGILLGLLIALLAFLGVAWH SLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAAAIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13288; Mature: 13288
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKCLIPLKNNLRDRASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYD CCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC GGILLGLLIALLAFLGVAWHSLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAA CHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIL HCC >Mature Secondary Structure MFKCLIPLKNNLRDRASQRLIGLLLVLGPSLAFAELPTMEAPSRGEGSGLIETIKNYAYD CCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC GGILLGLLIALLAFLGVAWHSLTVYADVQNQRKTWKDLGAVVGIGALLVVIIIWFLTKAA CHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA