| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459234
Identifier: 77459234
GI number: 77459234
Start: 3450757
End: 3452862
Strand: Direct
Name: 77459234
Synonym: Pfl01_3012
Alternate gene names: NA
Gene position: 3450757-3452862 (Clockwise)
Preceding gene: 77459233
Following gene: 77459235
Centisome position: 53.6
GC content: 60.16
Gene sequence:
>2106_bases ATGGCCGAGCATGCAATGGAGTCCAAGCTCCGGCCAGCGGTGGAGCTATACACCGTAGCGATCTGCATCGCTGCCGCGGT GTTGTGCGTGTACTCGCCCTGGGCTGTGGCCCTGTCACCCGAGATCGGTCTGGTTGCAGCGCTGGCCTATGCCCTGTTCG GCCTTATCCGGCTGCGACAAGCCTGGGAGGTGCTGCGTTATCGGCGCAATATCCGTCGGCTGCCCCGCTACGGGCTGACC AGTCGGCAGATTCCGGTCAGCCGCAAGCGTCTGTTCATGGGCCGTGGCTTTCGCTGGACCCGCCTGCACACCCAACGTTT GGTTGAGGCCCAGGATCCGGCGGTCGCCCACTATGTCGAGCAACCGACCCGTTACCGTCTGGCCCGAGGACTCGAACGCC GCCTGGAACATGCACCGTTTCCGTTCTCGACACTGGCCCGTGCCACCGCCTGGGACAGCGCCTTCAATCCGTTGCGCCCT TTGCCCCAAGTAGGTGGCTCGCCGCTGTTGCATGGGGTGGAGCCTGATGAAACAGAAGTCAGTCTACCGCTGGGCGAACG GGTCGGTCACACCCTGGTGCTCGGCACTACCCGTGTCGGCAAGACGCGACTCGCCGAGGTGTATATCACCCAGGACATTC ATCGCATCGAACATGAAGTGGTCATAGTCTTCGATCCGAAGGGCGATGCCGACCTGCTCAAACGGATGTACGTTGAAGCC AAGCGGGCAGGTCGAGATAAGGAGTTTTATGTTTTCCATCTAGGCTGGCCGGAGATCTCCGCTCGATACAATGCGGTGGG ACGCTTCGGGCGTATCTCGGAAGTGGCGTCACGCATCGCCGGGCAGCTCAGCGGCGAAGGTAACTCCGCGGCCTTTCGCG AGTTTGCCTGGCGTTTCGTCAACATCATCGCCCGTGCCCTGATCGAGTTAGGCCGGCGTCCGGACTACTTGCAGATCCAA CGGCATGTGGTCAACATCGACGCACTGTTCATCGAGTACGCCCAGCAGTTTTTCGCCAAGACCGACCCGAAGGCGTGGGA GGTGATCGTTCAGCTCGAAGGCAAGCTCACCGAAAAGAACATTCCCCGGCATATGATCGGGCGCGAAAAGCGTGTGGTGG CCATCGAACAGTACCTGGCGGTGAAGCGGGTATTTGATCCGGTCATGGACGGGCTGCGTTCGGCGGTACGATATGATCGT ACTTACTTCGACAAAATCGTTGCCTCACTACTGCCGCTGCTGGAGAAACTCACCACCGGCAAGACCGCCCAACTGCTGGC GCCAAACTACACCGACTTAGATGACCCGCGGCCAATCTTCGACTGGATGCAGATCATCCGAAAACGCGGCATCGTCTACG TCGGTTTGGATGCTCTGACCGACGCCGAGGTGGCCGCCGCTGTGGGCAACTCCATGTTCGCCGACTTGGTCTCGGTCGCC GGACACATTTACAAACACGGCATCGACCATGGCCTGCCCCCATCGGGTAACAGCAGTGACAAGTTGCCGATCAACCTGCA CGCCGATGAGTTCAACGAGTTGATGGGGGATGAATTCATCCCGCTGATCAATAAGGGCGGCGGTGCCGGTATTCAGGTAA CCGCCTACACCCAGACCCTCAGTGATATCGAAGCACGTATCGGCAACCGCGCCAAAGCTGGCCAGGTTATTGGCAACTTC AACACCCTGCAGATGCTGCGGGTGCGCGAAACCGCCACCGCTGAACTGCTCACTCAGCAATTGCCCAAGGTCAACGTGCT GACCAAGACCCTGGTGTCGGGTGCCACCGACACCTCCGATCCGGAAGCCCATACGGACTTCACTTCGTCCTCGCAGGACC GCGTCAGCAGCACCAGCGTGCCGTTGATCGAGCCTGCCCACATCGTCAGTTTGCCCAAAGGGCAAATGTTCTCCTTCCAA GCCGGTGGGCAGCTCTGGAAAGTCCGCATGCCCTTACCAAAACCCTCCAACGACGATGCCATGCCCAAGGACTTGCAGGA GCTCACCCAGCGAATGCGGGCCACCTACAACACGCAGGCGGGGCAATGGTGGAGCGCCAGTGGTGGCGGCCCAACAACAA ACTTCGATCTGGATCAGGTGGGGTAG
Upstream 100 bases:
>100_bases CATCCTGCCGGTCAACGGTAACGACATCGCCACTCGCCTGCAGATCGAGCACTACCCCGTCTTGATCACTGCCACCTCAC TGGAACAGTGAGTCCAGGTC
Downstream 100 bases:
>100_bases CCCGCCCCTGCCACAGGTTTCAATTCAGCAGAAAACGATCAAGAAGGCGTCGTGCCCACATCAACTCTGCAGCGTGCAAT GGAGTAAACGATGGCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLT SRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRP LPQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQ RHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDR TYFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNF NTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQ AGGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG
Sequences:
>Translated_701_residues MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLT SRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRP LPQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQ RHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDR TYFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNF NTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQ AGGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG >Mature_700_residues AEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQAWEVLRYRRNIRRLPRYGLTS RQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVEQPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPL PQVGGSPLLHGVEPDETEVSLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEAK RAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQR HVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKNIPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRT YFDKIVASLLPLLEKLTTGKTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVAG HIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNFN TLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSDPEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQA GGQLWKVRMPLPKPSNDDAMPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78361; Mature: 78230
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQ CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH AWEVLRYRRNIRRLPRYGLTSRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHC QPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPLPQVGGSPLLHGVEPDETEV CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEE SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA ECCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV HHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC IPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECHHHCHHHHHHHHHHHHHHHHHHHH GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL HHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEHHHHH SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQAGGQLWKVRMPLPKPSNDDA CCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEEECCCCCCCCCC MPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHCCC >Mature Secondary Structure AEHAMESKLRPAVELYTVAICIAAAVLCVYSPWAVALSPEIGLVAALAYALFGLIRLRQ CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH AWEVLRYRRNIRRLPRYGLTSRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHC QPTRYRLARGLERRLEHAPFPFSTLARATAWDSAFNPLRPLPQVGGSPLLHGVEPDETEV CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCEE SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA ECCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH KRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV HHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC IPRHMIGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECHHHCHHHHHHHHHHHHHHHHHHHH GHIYKHGIDHGLPPSGNSSDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL HHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEHHHHH SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PEAHTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQAGGQLWKVRMPLPKPSNDDA CCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEECCCCEEEEEECCCCCCCCCC MPKDLQELTQRMRATYNTQAGQWWSASGGGPTTNFDLDQVG CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA