| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459221
Identifier: 77459221
GI number: 77459221
Start: 3441276
End: 3441794
Strand: Direct
Name: 77459221
Synonym: Pfl01_2999
Alternate gene names: NA
Gene position: 3441276-3441794 (Clockwise)
Preceding gene: 77459220
Following gene: 77459222
Centisome position: 53.45
GC content: 57.23
Gene sequence:
>519_bases ATGAATCCGATGATCCCGGCTCAACCAATGCCCTTCGAAGCGTTAACACCGGATGCCTATCGACAACTCGAACACGCAGC CTCCCTAAAAGGCCTTTTAAAGCCCTTTAAGGGTAAGGGGGAGTTGGAGCACCTGGCGCAGGTGGCGAGGGAAATCGAGG CGCAATTATGCCACCTGATGGAGGCCGTGGTGCAGCAGGCCGGACAGCCCCCTTACTCACTGCTGGATATCCGATTGGTT CTGCAGAACACCAGCGCCGGCAGCACCTTTTTGCGTTGGCGCACCCGTGATTTTGCCCGTATGGGAGTCTCGGTCTGGGA ACGCCAGGTCTGCAACAAAGCCTTGTCGCAGATCGTACGCGAGAGATTGCACCGTTTCGAATGCGAGCGCATTGCACTGA ACCTACAGATGAGCGTGGTGCATTCGCTTTACCGCCAGGCCACGACCTGCGCAATCAAAATGGCCAGCGCCGAACAGCTG CTGCGCCAGTTCACACCCGCAATGGAGGTATCACGATGA
Upstream 100 bases:
>100_bases CAATCACTCGCCGTGATGCGGTGGCAGTGGATGACGCCGAAGCGTTGGCAGAGGACGTGGTAGCGTCGTCTGCGACAGTG AGTAAGCCGGAGGACGACGC
Downstream 100 bases:
>100_bases GTACTTTTTTCGTTGGCGAAGGCAATATCGGCAGTGCGCCAGAGTTCCAGGAGTTTCCATCAGGCAATGACGAGCCACGA CGTTTGCTACGGCTGAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNPMIPAQPMPFEALTPDAYRQLEHAASLKGLLKPFKGKGELEHLAQVAREIEAQLCHLMEAVVQQAGQPPYSLLDIRLV LQNTSAGSTFLRWRTRDFARMGVSVWERQVCNKALSQIVRERLHRFECERIALNLQMSVVHSLYRQATTCAIKMASAEQL LRQFTPAMEVSR
Sequences:
>Translated_172_residues MNPMIPAQPMPFEALTPDAYRQLEHAASLKGLLKPFKGKGELEHLAQVAREIEAQLCHLMEAVVQQAGQPPYSLLDIRLV LQNTSAGSTFLRWRTRDFARMGVSVWERQVCNKALSQIVRERLHRFECERIALNLQMSVVHSLYRQATTCAIKMASAEQL LRQFTPAMEVSR >Mature_172_residues MNPMIPAQPMPFEALTPDAYRQLEHAASLKGLLKPFKGKGELEHLAQVAREIEAQLCHLMEAVVQQAGQPPYSLLDIRLV LQNTSAGSTFLRWRTRDFARMGVSVWERQVCNKALSQIVRERLHRFECERIALNLQMSVVHSLYRQATTCAIKMASAEQL LRQFTPAMEVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19588; Mature: 19588
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPMIPAQPMPFEALTPDAYRQLEHAASLKGLLKPFKGKGELEHLAQVAREIEAQLCHLM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH EAVVQQAGQPPYSLLDIRLVLQNTSAGSTFLRWRTRDFARMGVSVWERQVCNKALSQIVR HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERLHRFECERIALNLQMSVVHSLYRQATTCAIKMASAEQLLRQFTPAMEVSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure MNPMIPAQPMPFEALTPDAYRQLEHAASLKGLLKPFKGKGELEHLAQVAREIEAQLCHLM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH EAVVQQAGQPPYSLLDIRLVLQNTSAGSTFLRWRTRDFARMGVSVWERQVCNKALSQIVR HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERLHRFECERIALNLQMSVVHSLYRQATTCAIKMASAEQLLRQFTPAMEVSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA