| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459206
Identifier: 77459206
GI number: 77459206
Start: 3424074
End: 3424361
Strand: Direct
Name: 77459206
Synonym: Pfl01_2981
Alternate gene names: NA
Gene position: 3424074-3424361 (Clockwise)
Preceding gene: 77459177
Following gene: 77459209
Centisome position: 53.18
GC content: 56.25
Gene sequence:
>288_bases TTGAAAAAAATCATATTTTCCGCTTGCTTGGTTTTCTTTGCCTGCGCTGAGGCGGCTCAAGAGCCCGAAGCCGTATTCAA CCGTAGCTGTGTGATGTGCCACAGCGGCCAACTCCCGGCCGCGCCTAAGAAAGGCGATCCATCCGCTTGGCAACCTCGCT TGGATAAAGGGATGGACGTATTAGTGGCGCATGCTACCGGGGGGTACGGGGCAATGCCTCCGCGCGGCCTCTGCATGGAC TGCAGCGCCGAAGACTACCGAGCGGTTATTGATTGGATGTCGAAGTAA
Upstream 100 bases:
>100_bases CGCCTGACGAGTTGTGGAGGACACATGTGTTCAGGAACTGAACACATTCCTGAAGTTTCGACCGTCACGGTAGAGCCTTA ATACAATTCATAGGTGAATT
Downstream 100 bases:
>100_bases CCTAGCCTAGCTTTACGGCGCTAAAACGACCCTTCACATTTCTGAGGCCAGCCCTGTCGGCAGGGTGGTGCAGGCGGATG CGACTGATGACAAGTGCAGC
Product: cytochrome c-type protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD CSAEDYRAVIDWMSK
Sequences:
>Translated_95_residues MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD CSAEDYRAVIDWMSK >Mature_95_residues MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD CSAEDYRAVIDWMSK
Specific function: It is unreactive with cytochrome c reductase or oxidase [H]
COG id: COG3245
COG function: function code C; Cytochrome c5
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR002323 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10283; Mature: 10283
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 12.6 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 12.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDV CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE LVAHATGGYGAMPPRGLCMDCSAEDYRAVIDWMSK EEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDV CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE LVAHATGGYGAMPPRGLCMDCSAEDYRAVIDWMSK EEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2993632 [H]