| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459178
Identifier: 77459178
GI number: 77459178
Start: 3393148
End: 3393564
Strand: Reverse
Name: 77459178
Synonym: Pfl01_2953
Alternate gene names: NA
Gene position: 3393564-3393148 (Counterclockwise)
Preceding gene: 77459179
Following gene: 77459176
Centisome position: 52.71
GC content: 48.44
Gene sequence:
>417_bases ATGTCGGTCGAAGCAAACAAAGAACTGGTGCGAAAATTTTATGCCGCTATTCAGCTTGAGGATTACGCGGCGGCGGCGAG TTGCTGCTATGAGAACTTTGTTTTTTATACCCAAGTAGACACGCCTATTCTTGGCACAGCAGGATTCATCCAGTCGGAGA AAAAAAACTTCGATGCCTTCGAAGGATTCACTTTTAAGATCGAATCACTGCTCGCCGAGGGCGATCAGGTTGCGGCTTAC ATGATATTCGATGGCCGGCAAACCGGAATATTTGAAGGGATTGAGCCGAAAGGGGCCCGAGTACGATTTTCGTTGATGAT GCTCCTGACCATTGCCGATGGAAAAATCATTGAAAAGCGCGCTCACTTTGACCGAATGGATATTCGCAAGCAGCTGGCCG CAACAGTAGGAGCCTGA
Upstream 100 bases:
>100_bases GAGAAGGGCATGACTGATCGCTTGCTCATCCCCGAAGACGGCGAGACTTGTAGTCTCTGATTCAGCGATCCCAAACGACC ATTCAGCAAGGAGAAAGTTA
Downstream 100 bases:
>100_bases AGAAATCGCCCAAAAAGCAGTCTGGCGAACCACGTTCTATAAGCAATGTTTTCGAGCTTATCGAATGGGAACGACCAGCT GCTTGAATCATGAAAAGGCG
Product: ester cyclase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSVEANKELVRKFYAAIQLEDYAAAASCCYENFVFYTQVDTPILGTAGFIQSEKKNFDAFEGFTFKIESLLAEGDQVAAY MIFDGRQTGIFEGIEPKGARVRFSLMMLLTIADGKIIEKRAHFDRMDIRKQLAATVGA
Sequences:
>Translated_138_residues MSVEANKELVRKFYAAIQLEDYAAAASCCYENFVFYTQVDTPILGTAGFIQSEKKNFDAFEGFTFKIESLLAEGDQVAAY MIFDGRQTGIFEGIEPKGARVRFSLMMLLTIADGKIIEKRAHFDRMDIRKQLAATVGA >Mature_137_residues SVEANKELVRKFYAAIQLEDYAAAASCCYENFVFYTQVDTPILGTAGFIQSEKKNFDAFEGFTFKIESLLAEGDQVAAYM IFDGRQTGIFEGIEPKGARVRFSLMMLLTIADGKIIEKRAHFDRMDIRKQLAATVGA
Specific function: Unknown
COG id: COG5485
COG function: function code R; Predicted ester cyclase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15443; Mature: 15312
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEANKELVRKFYAAIQLEDYAAAASCCYENFVFYTQVDTPILGTAGFIQSEKKNFDAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCCCCC EGFTFKIESLLAEGDQVAAYMIFDGRQTGIFEGIEPKGARVRFSLMMLLTIADGKIIEKR CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEHHCCCCEEHHH AHFDRMDIRKQLAATVGA HCCCHHHHHHHHHHHCCC >Mature Secondary Structure SVEANKELVRKFYAAIQLEDYAAAASCCYENFVFYTQVDTPILGTAGFIQSEKKNFDAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCCCCC EGFTFKIESLLAEGDQVAAYMIFDGRQTGIFEGIEPKGARVRFSLMMLLTIADGKIIEKR CCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEHHCCCCEEHHH AHFDRMDIRKQLAATVGA HCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA