| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459147
Identifier: 77459147
GI number: 77459147
Start: 3367897
End: 3368415
Strand: Reverse
Name: 77459147
Synonym: Pfl01_2922
Alternate gene names: NA
Gene position: 3368415-3367897 (Counterclockwise)
Preceding gene: 77459149
Following gene: 77459143
Centisome position: 52.32
GC content: 55.88
Gene sequence:
>519_bases ATGATCCGACCGTTCAAATCGCTGTTCGTTTTCCTGGGTTTTTCTCTTCTGGCGCTACCGGCTTTTGCCGAGGCGCCGAG CATCACCTGGCCTGCCGGCTGGGAGGTCGAGGCGCTGCCCGAAACCTCGCCTGAAGTCTCGCGTCAGCGCGCAGTGAAAA CTGACGCCGATGGCAATCAGGTGATGGTGATGGAGTTGACGATGACCCGTGTGGAAAGTGGTCATCAGGTCAACTTGCAA GGCGTGTTGCTTGAGATGCGCAAGTCGGTGCAGAAAGACTTTTTCCAGAGCGGTTATCAGAGTGTCTGCAACAAGGTTCA CGCGAGTACGCTGGGCTCGCTGACAGCGCTTGAGACCACTTGTACGGTGACTGAAAACGGCCGTCATGTGTTGTCGCAAA CATTGGTTGCAGCGGTCGAGGCGGATAAGGCCTATGTACTTTCGTATGCAGGGCAGGCGGAGGTTTATAAGGCCAGCGGC GACGACATAGTGGCTGCGCGAAACAGCTTGAAATTCTAG
Upstream 100 bases:
>100_bases ATACGCATGCCTTGCGGCATCGCCAAACCGAAAGCGCGGGCTTGCCCTGCAAGCGGGCGAGCCTCAGACTTTACGGCTCA ATCCGCGAGTGCCTCTGGTA
Downstream 100 bases:
>100_bases TCGTCTGTTCGGGGGCAGTCTGGTGTTAGATACCGGAAATGATTAAACATAAAGTTAATTCCGGCTAACGGGGCAACACT CGGAAGCATAGTTTCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MIRPFKSLFVFLGFSLLALPAFAEAPSITWPAGWEVEALPETSPEVSRQRAVKTDADGNQVMVMELTMTRVESGHQVNLQ GVLLEMRKSVQKDFFQSGYQSVCNKVHASTLGSLTALETTCTVTENGRHVLSQTLVAAVEADKAYVLSYAGQAEVYKASG DDIVAARNSLKF
Sequences:
>Translated_172_residues MIRPFKSLFVFLGFSLLALPAFAEAPSITWPAGWEVEALPETSPEVSRQRAVKTDADGNQVMVMELTMTRVESGHQVNLQ GVLLEMRKSVQKDFFQSGYQSVCNKVHASTLGSLTALETTCTVTENGRHVLSQTLVAAVEADKAYVLSYAGQAEVYKASG DDIVAARNSLKF >Mature_172_residues MIRPFKSLFVFLGFSLLALPAFAEAPSITWPAGWEVEALPETSPEVSRQRAVKTDADGNQVMVMELTMTRVESGHQVNLQ GVLLEMRKSVQKDFFQSGYQSVCNKVHASTLGSLTALETTCTVTENGRHVLSQTLVAAVEADKAYVLSYAGQAEVYKASG DDIVAARNSLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18747; Mature: 18747
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPFKSLFVFLGFSLLALPAFAEAPSITWPAGWEVEALPETSPEVSRQRAVKTDADGNQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCE VMVMELTMTRVESGHQVNLQGVLLEMRKSVQKDFFQSGYQSVCNKVHASTLGSLTALETT EEEEEEEEHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEE CTVTENGRHVLSQTLVAAVEADKAYVLSYAGQAEVYKASGDDIVAARNSLKF EEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEECCCCCCC >Mature Secondary Structure MIRPFKSLFVFLGFSLLALPAFAEAPSITWPAGWEVEALPETSPEVSRQRAVKTDADGNQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCE VMVMELTMTRVESGHQVNLQGVLLEMRKSVQKDFFQSGYQSVCNKVHASTLGSLTALETT EEEEEEEEHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEE CTVTENGRHVLSQTLVAAVEADKAYVLSYAGQAEVYKASGDDIVAARNSLKF EEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA