| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yetK [H]
Identifier: 77459143
GI number: 77459143
Start: 3363551
End: 3364498
Strand: Reverse
Name: yetK [H]
Synonym: Pfl01_2918
Alternate gene names: 77459143
Gene position: 3364498-3363551 (Counterclockwise)
Preceding gene: 77459147
Following gene: 77459142
Centisome position: 52.26
GC content: 62.55
Gene sequence:
>948_bases ATGAGTTGTCATGAACCTGTCCGTCCGGCCGCCTCGGACATGCCCGTCTATTTGAACCTGGCCCTGGTCACCATGATCTG GGGCGGAACGTGGGTGGCCGGGCGGTTTCTGGCCGGCAGCCTGAGTCCGGTCTTCGCCGCCAGCTTGCGATTTCTGCTGG CCAGTGTGGCGTTGCTCGGGTTTCTGCGACTGGCGCGGATTGCGCTGGCGCGGCCCACGCCCCGGCAATGGCTGCAACTG GCGCTGCTGGGGTTCTTCGGGATCTTCTTCTACAACCTGTGCTTCTTTTACGGGTTGCGATACATCAACGCTTCCCGGGC CTCGTTGATCGTGGCGCTGAATCCGGCGGTGATCGGTCTGGCATCGTGGCTGCTGTTCAAGGAGCGGCTGAGCCGGCTGA AGGTCATCGGCATCGTAATCTGCATCGGTGGGGCAGGTGTGGTGATCGTCAGTCGCCACCCGCAGTTGTTGAGCGAAACG CCGGACGCGTGGATTGGCGACCTGCTGATCCTCGGCTGTGTGCTGAGCTGGGGCGTCTATTCGCTGTTCTCCCGCAGCCT CAACCAGAGCATCGGCCCGGTGCAGACCGTGACCTTTTCGATTCTGCTGGGCACCTTGATGTTGTGGGCGTTGGCCCTGA GCCGTGGCGAAGTCGACGTTGCGGCGCTGGCCGCACTTGGCTCGCGCCAATGGCTGAGCCTGGCCTATCTGGGCGTACTC GGCTCGGCGCTGGCTTACATCGGTTATTACGATGGCATCCGTAAAATCGGCGCCACGCGCTCTGGTGTATTCATTGCGCT CAACCCGCTGACCGCCGTGCTGGCCGGCGCAATCCTGCTGGGCGAACAGCTGACGCTGGCCATGTGCCTGGGCGGCGCGC TGATTCTGACGGGCATCTGGCTGTGCAACAAACCCCTTGCACCAGCCGGAAAAAAGCGGATTTTATAG
Upstream 100 bases:
>100_bases ATTTCGAGTTGGGTCAGGGTCATGAGTAAAGACTCATTTTACGATGATGAGGAATCAATCGAATGATACGTCATCCGTCA GCCTCATCGTGGGGAGCGTT
Downstream 100 bases:
>100_bases AGAGAGCAGACAACCCTATTTACGCTGTGTAGAATCGGGTTACGCATACAATAATAATCGTCTTCTGGCAGCAGAAGCCT CGCCCGCAAGAGCCTTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSCHEPVRPAASDMPVYLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLGFLRLARIALARPTPRQWLQL ALLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGLASWLLFKERLSRLKVIGIVICIGGAGVVIVSRHPQLLSET PDAWIGDLLILGCVLSWGVYSLFSRSLNQSIGPVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVL GSALAYIGYYDGIRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIWLCNKPLAPAGKKRIL
Sequences:
>Translated_315_residues MSCHEPVRPAASDMPVYLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLGFLRLARIALARPTPRQWLQL ALLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGLASWLLFKERLSRLKVIGIVICIGGAGVVIVSRHPQLLSET PDAWIGDLLILGCVLSWGVYSLFSRSLNQSIGPVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVL GSALAYIGYYDGIRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIWLCNKPLAPAGKKRIL >Mature_314_residues SCHEPVRPAASDMPVYLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLGFLRLARIALARPTPRQWLQLA LLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGLASWLLFKERLSRLKVIGIVICIGGAGVVIVSRHPQLLSETP DAWIGDLLILGCVLSWGVYSLFSRSLNQSIGPVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVLG SALAYIGYYDGIRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIWLCNKPLAPAGKKRIL
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33747; Mature: 33616
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCHEPVRPAASDMPVYLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLG CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FLRLARIALARPTPRQWLQLALLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH ASWLLFKERLSRLKVIGIVICIGGAGVVIVSRHPQLLSETPDAWIGDLLILGCVLSWGVY HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHH SLFSRSLNQSIGPVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH GSALAYIGYYDGIRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIW HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCNKPLAPAGKKRIL HCCCCCCCCCCCCCC >Mature Secondary Structure SCHEPVRPAASDMPVYLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLG CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FLRLARIALARPTPRQWLQLALLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH ASWLLFKERLSRLKVIGIVICIGGAGVVIVSRHPQLLSETPDAWIGDLLILGCVLSWGVY HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHH SLFSRSLNQSIGPVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH GSALAYIGYYDGIRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIW HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCNKPLAPAGKKRIL HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]