| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fbpB [H]
Identifier: 77459063
GI number: 77459063
Start: 3273911
End: 3275506
Strand: Direct
Name: fbpB [H]
Synonym: Pfl01_2838
Alternate gene names: 77459063
Gene position: 3273911-3275506 (Clockwise)
Preceding gene: 77459062
Following gene: 77459064
Centisome position: 50.85
GC content: 65.6
Gene sequence:
>1596_bases ATGCCTGAAACTCTGCCGGCGGGGATCGCTGCGGCGCCCTCCGCCCATTTGTCACGCCGGACCCGCGCCCTCAATGGGCG CGGAAGTCCGTGGGTGGTCGTGCTGGCCATCGCGGTGTCGCTGCTGTCATTGGTGCCGATCGGCTTTGTGATCGGCGTGT CGTGGTACACCGGGTGGTCGACCATCGAAGCCTTGGTCTTTCGCCCTCGGGTCGCCGAGCTGCTGATCAACACCGTGCTG CTGGTGCTGATCACGCTGCCGATCTGCATCGTGCTCGGCACCACGCTAGCGTGGTTGACCGAACGCACCGATCTGCCGGG GCGACGGCTGTGGTCATTGCTGGCCGTTGCGCCGCTGGCGGTGCCGGCGTTCGTGCACAGCTACGCATGGGTCAGCCTGT TTCCGTCGATTCATGGGCTGCCGGCCGGGGTGCTGGTGTCGGTGATCGCCTATTTCCCGTTCCTCTATTTGCCGATTGCG GCGACGTTGCGTCGACTCGATCCGGCGATTGAAGACGTGGCCGAATCCCTCGGCCTGAAACCGTGGGCCGTGTTCTTCCG TGTGGTGCTGCCGCAATTACGGCTGGCGATCTGTGGCGGCGCGTTGCTGGTCGGCCTGCACTTGCTGGCCGAATATGGCC TGTACGCAATGATCCGTTTCGACACCTTCACCACGGCGATCTTCGACCAGTTCAAATCGACCTTTAACGGCCCGGCCGCC AACATGCTCGCCAGCGTTCTGGCGTTGTGCTGCCTGGCGATGCTGGTGGTGGAATCCGGCGCCCGTGGTCATGCGCGATA CGCCCGCGTCGGCTCCGGCAGCGCTCGCGAACAACGCACCGTGCGCTTGCAACGGCGCACCGCCGCGCTGGGTTTGTGCC TGCAAGGCCTGACCTGCCTGCTGGCGCTCGGCGTGCCGTTGCTGACCCTCGGCAAATGGCTGATCGCTGGCGGTGCCGAG GTCTGGCAGGGCAATGAGTTACTGCCGGCGTTGCTGCAGACACTGTCGTTCGGCGTGGCCGGCGCGCTGTTGACCAGCCT CGCGGCAATTCCGATTGCCTGGCTGTCGATCCGGGCGCCCGGCAAGCTGCAACGCCTGCTTGAGGGTTGCAATTACATCA CCAGCGCATTGCCCGGGATTGTCGTGGCGCTGGCGCTGGTCACCGTGACGATCCATTTCGCCCGACCGATCTACCAGACC ACTTTTACCGTGCTGCTGGCCTACCTGCTGATGTTCCTGCCCCGGGCGCTGGTCAGCCTGCGCGCCGGGTTTGCACAGGC ACCGGTGGAGCTGGAAAACATCGCACAAAGCCTCGGCCGTTCACCGTTGCGCGCCCTCTGGCTGATCACCTTGCGTCTGG CGGCGCCCGGTGCGGCGGCGGGCGCGGCGCTGGTGTTTCTGGCGATCACCAATGAACTGACCGCGACCCTGCTGCTCGCG CCCAACGGCACGCGCACCCTGGCCACCGGTTTCTGGGCCATGACCAGCGAAATCGACTACGCCGCCGCAGCGCCTTACGC CCTGCTGATGGTGCTGCTGTCGCTGCCGCTCACGGCCATCCTCTATCACCAATCCAGGCGCAGTGCCGGCCGATGA
Upstream 100 bases:
>100_bases GGTGCCGTTGAAGGATCTGGACGCGCCGAAAGTCGATGCATCGAAGCTCGACAGCAAGAAAGCCGTCGAACTGATGACCC AGGCAGGACTGCTGTAATTG
Downstream 100 bases:
>100_bases ACGCTCTCGACATCATCAATCTCAGCAAATCCTTCGGCGCACAGACGGCGCTGGACTCCATCAACCTGTCCGTCCCGACC GGCAGCCGCACGGTGATCGT
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein sfuB [H]
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPETLPAGIAAAPSAHLSRRTRALNGRGSPWVVVLAIAVSLLSLVPIGFVIGVSWYTGWSTIEALVFRPRVAELLINTVL LVLITLPICIVLGTTLAWLTERTDLPGRRLWSLLAVAPLAVPAFVHSYAWVSLFPSIHGLPAGVLVSVIAYFPFLYLPIA ATLRRLDPAIEDVAESLGLKPWAVFFRVVLPQLRLAICGGALLVGLHLLAEYGLYAMIRFDTFTTAIFDQFKSTFNGPAA NMLASVLALCCLAMLVVESGARGHARYARVGSGSAREQRTVRLQRRTAALGLCLQGLTCLLALGVPLLTLGKWLIAGGAE VWQGNELLPALLQTLSFGVAGALLTSLAAIPIAWLSIRAPGKLQRLLEGCNYITSALPGIVVALALVTVTIHFARPIYQT TFTVLLAYLLMFLPRALVSLRAGFAQAPVELENIAQSLGRSPLRALWLITLRLAAPGAAAGAALVFLAITNELTATLLLA PNGTRTLATGFWAMTSEIDYAAAAPYALLMVLLSLPLTAILYHQSRRSAGR
Sequences:
>Translated_531_residues MPETLPAGIAAAPSAHLSRRTRALNGRGSPWVVVLAIAVSLLSLVPIGFVIGVSWYTGWSTIEALVFRPRVAELLINTVL LVLITLPICIVLGTTLAWLTERTDLPGRRLWSLLAVAPLAVPAFVHSYAWVSLFPSIHGLPAGVLVSVIAYFPFLYLPIA ATLRRLDPAIEDVAESLGLKPWAVFFRVVLPQLRLAICGGALLVGLHLLAEYGLYAMIRFDTFTTAIFDQFKSTFNGPAA NMLASVLALCCLAMLVVESGARGHARYARVGSGSAREQRTVRLQRRTAALGLCLQGLTCLLALGVPLLTLGKWLIAGGAE VWQGNELLPALLQTLSFGVAGALLTSLAAIPIAWLSIRAPGKLQRLLEGCNYITSALPGIVVALALVTVTIHFARPIYQT TFTVLLAYLLMFLPRALVSLRAGFAQAPVELENIAQSLGRSPLRALWLITLRLAAPGAAAGAALVFLAITNELTATLLLA PNGTRTLATGFWAMTSEIDYAAAAPYALLMVLLSLPLTAILYHQSRRSAGR >Mature_530_residues PETLPAGIAAAPSAHLSRRTRALNGRGSPWVVVLAIAVSLLSLVPIGFVIGVSWYTGWSTIEALVFRPRVAELLINTVLL VLITLPICIVLGTTLAWLTERTDLPGRRLWSLLAVAPLAVPAFVHSYAWVSLFPSIHGLPAGVLVSVIAYFPFLYLPIAA TLRRLDPAIEDVAESLGLKPWAVFFRVVLPQLRLAICGGALLVGLHLLAEYGLYAMIRFDTFTTAIFDQFKSTFNGPAAN MLASVLALCCLAMLVVESGARGHARYARVGSGSAREQRTVRLQRRTAALGLCLQGLTCLLALGVPLLTLGKWLIAGGAEV WQGNELLPALLQTLSFGVAGALLTSLAAIPIAWLSIRAPGKLQRLLEGCNYITSALPGIVVALALVTVTIHFARPIYQTT FTVLLAYLLMFLPRALVSLRAGFAQAPVELENIAQSLGRSPLRALWLITLRLAAPGAAAGAALVFLAITNELTATLLLAP NGTRTLATGFWAMTSEIDYAAAAPYALLMVLLSLPLTAILYHQSRRSAGR
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=217, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56740; Mature: 56609
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETLPAGIAAAPSAHLSRRTRALNGRGSPWVVVLAIAVSLLSLVPIGFVIGVSWYTGWS CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEALVFRPRVAELLINTVLLVLITLPICIVLGTTLAWLTERTDLPGRRLWSLLAVAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VPAFVHSYAWVSLFPSIHGLPAGVLVSVIAYFPFLYLPIAATLRRLDPAIEDVAESLGLK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC PWAVFFRVVLPQLRLAICGGALLVGLHLLAEYGLYAMIRFDTFTTAIFDQFKSTFNGPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHCCCHHH NMLASVLALCCLAMLVVESGARGHARYARVGSGSAREQRTVRLQRRTAALGLCLQGLTCL HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALGVPLLTLGKWLIAGGAEVWQGNELLPALLQTLSFGVAGALLTSLAAIPIAWLSIRAP HHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GKLQRLLEGCNYITSALPGIVVALALVTVTIHFARPIYQTTFTVLLAYLLMFLPRALVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGFAQAPVELENIAQSLGRSPLRALWLITLRLAAPGAAAGAALVFLAITNELTATLLLA HHCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEC PNGTRTLATGFWAMTSEIDYAAAAPYALLMVLLSLPLTAILYHQSRRSAGR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PETLPAGIAAAPSAHLSRRTRALNGRGSPWVVVLAIAVSLLSLVPIGFVIGVSWYTGWS CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEALVFRPRVAELLINTVLLVLITLPICIVLGTTLAWLTERTDLPGRRLWSLLAVAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VPAFVHSYAWVSLFPSIHGLPAGVLVSVIAYFPFLYLPIAATLRRLDPAIEDVAESLGLK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC PWAVFFRVVLPQLRLAICGGALLVGLHLLAEYGLYAMIRFDTFTTAIFDQFKSTFNGPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHCCCHHH NMLASVLALCCLAMLVVESGARGHARYARVGSGSAREQRTVRLQRRTAALGLCLQGLTCL HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALGVPLLTLGKWLIAGGAEVWQGNELLPALLQTLSFGVAGALLTSLAAIPIAWLSIRAP HHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GKLQRLLEGCNYITSALPGIVVALALVTVTIHFARPIYQTTFTVLLAYLLMFLPRALVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGFAQAPVELENIAQSLGRSPLRALWLITLRLAAPGAAAGAALVFLAITNELTATLLLA HHCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEC PNGTRTLATGFWAMTSEIDYAAAAPYALLMVLLSLPLTAILYHQSRRSAGR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]