| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gnuT [H]
Identifier: 77459021
GI number: 77459021
Start: 3221373
End: 3222758
Strand: Reverse
Name: gnuT [H]
Synonym: Pfl01_2796
Alternate gene names: 77459021
Gene position: 3222758-3221373 (Counterclockwise)
Preceding gene: 77459022
Following gene: 77459020
Centisome position: 50.06
GC content: 56.85
Gene sequence:
>1386_bases ATGACTCCCTTAGATATAGACCTCTTACTGACCGCATTGGTGAGCGTCCTGGTGCTGGTGGGGCTCATCGTGTCGCGTCT CAAAATGCACCCGCTCCTGGCCTTGTTAGTGGTGTCCGTGGGCGTTGGCTTTGCAACCAGTATGGAGCCGGAAGCCATCG TCTCCCACGTGATGACCGGCGCCGGAAAGACACTGGGGGCAGTAGGGGTCGTCATCGCGCTTGGAGCGATGCTAGGCAAA ATTCTTGCTGACGCAGGCGTCACAGAGCAGATCGCCGAGGTCATCCTCAAGCGAACATCGGATCGGATGATCCCTTGGGC CATGATGATGGTTGCATTTGTAATTGGCATTCCCATGTTTTTCGAGGTGGGCCTGGTGATCATGCTGCCGCTGATCTTCA GCGTGGCGCGAAAGCTGGAAAGCCAGGCTCGCTTCAAAGGTTCAGCGTATGTGTATGTAGGTGTTCCGGTGATTGCGGCA CTTGCAGCCATGCACGGGATGGTACCGCCGCACCCTGGCCCCTTGACGGCCATCGCTGCGCTCAAAACCTCGGTTGGGCC CACAATGCTCTATGGTTTCCTTGCGGCAATTCCTGCAATGATCTTAGGAGGCCCGCTTTATGGCGCATTCATTTCGCCGC GTATGAGCACTCGGCCGGATCAGGTTTTGCTGGATCAGTTCACCCTCGCCGAAAAAGCCGACGATCAACCTAGCACCAGC GTGTGCCTTGGTGTGCTGGCAGCCTTGCTACCGGCGATCCTGATGCTGATTCATGCCGTCGCTGAGATGCTATTACCCAA GGGCAATGCGATCCTGAAGATGGCTAGTTTCTTGGGCAATCCCCTGATAGCGATGCTTCTGGGCGTTCTGTTCGCAGGGG CGAGTCTGGTACTCGTGCGGGGTGGCGATGCGGGGCAATTGCGCGAATCTCTGGGCAAGAGTCTCAAGCCAATCGCTTCA ATCATCATGATCATCGCCGGCGGTGGTGCCTTTCAGGAGTTGCTGACCAGCGCCAAGGTGGGCGATGCCATTGTGCACCT GACTCAACAGTCTGCGTTCCCTCCGCTGATCCTGGGCTGGTTGATTGCGATGCTGCTCTCGGTATCTACCGGTTCAGCCA CTGTAGGTATCGTTGGTGCTGCTGGCTTGCTGGCGCCGCTTGCAGGTGCTGATCCAGGCCTCAACCTGCCTCTGCTTGCC TTGTCCATCGGCTGCGGCTCGCTGTTCTTCAACTATGCGAACCATGCGGGCTTCTGGATGGTGAAGGAATCCTTCGGCAT GACGATGGGCGAAGCAACCAAGACCATTTCGGTGGTTCAATCCATCGTAGCCGTGGTCGGTTTGATTGTGGTGTTGATGT TGAATGCGGTTGTCACAGTGACTTGA
Upstream 100 bases:
>100_bases CGATGTTTGGTTTATCGCGTGCAACGACAGGCGTTACGGTTTCAAACTTCTCTTTCAAATCTGACTGCAGTTTGAGCGTC AGCCCAACCGAGATCCTTTC
Downstream 100 bases:
>100_bases TTCAGAATCTGTTCGCAGGTAGTGAGTCTGCCCGGGCGTGTTAGCCGAGTGTGGGAAATAGAGTACGCTCCACAGGATGT TTACCATCGAACGTAAATCC
Product: gluconate transporter
Products: gluconate [Cytoplasm]; L-idonate [Cytoplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTPLDIDLLLTALVSVLVLVGLIVSRLKMHPLLALLVVSVGVGFATSMEPEAIVSHVMTGAGKTLGAVGVVIALGAMLGK ILADAGVTEQIAEVILKRTSDRMIPWAMMMVAFVIGIPMFFEVGLVIMLPLIFSVARKLESQARFKGSAYVYVGVPVIAA LAAMHGMVPPHPGPLTAIAALKTSVGPTMLYGFLAAIPAMILGGPLYGAFISPRMSTRPDQVLLDQFTLAEKADDQPSTS VCLGVLAALLPAILMLIHAVAEMLLPKGNAILKMASFLGNPLIAMLLGVLFAGASLVLVRGGDAGQLRESLGKSLKPIAS IIMIIAGGGAFQELLTSAKVGDAIVHLTQQSAFPPLILGWLIAMLLSVSTGSATVGIVGAAGLLAPLAGADPGLNLPLLA LSIGCGSLFFNYANHAGFWMVKESFGMTMGEATKTISVVQSIVAVVGLIVVLMLNAVVTVT
Sequences:
>Translated_461_residues MTPLDIDLLLTALVSVLVLVGLIVSRLKMHPLLALLVVSVGVGFATSMEPEAIVSHVMTGAGKTLGAVGVVIALGAMLGK ILADAGVTEQIAEVILKRTSDRMIPWAMMMVAFVIGIPMFFEVGLVIMLPLIFSVARKLESQARFKGSAYVYVGVPVIAA LAAMHGMVPPHPGPLTAIAALKTSVGPTMLYGFLAAIPAMILGGPLYGAFISPRMSTRPDQVLLDQFTLAEKADDQPSTS VCLGVLAALLPAILMLIHAVAEMLLPKGNAILKMASFLGNPLIAMLLGVLFAGASLVLVRGGDAGQLRESLGKSLKPIAS IIMIIAGGGAFQELLTSAKVGDAIVHLTQQSAFPPLILGWLIAMLLSVSTGSATVGIVGAAGLLAPLAGADPGLNLPLLA LSIGCGSLFFNYANHAGFWMVKESFGMTMGEATKTISVVQSIVAVVGLIVVLMLNAVVTVT >Mature_460_residues TPLDIDLLLTALVSVLVLVGLIVSRLKMHPLLALLVVSVGVGFATSMEPEAIVSHVMTGAGKTLGAVGVVIALGAMLGKI LADAGVTEQIAEVILKRTSDRMIPWAMMMVAFVIGIPMFFEVGLVIMLPLIFSVARKLESQARFKGSAYVYVGVPVIAAL AAMHGMVPPHPGPLTAIAALKTSVGPTMLYGFLAAIPAMILGGPLYGAFISPRMSTRPDQVLLDQFTLAEKADDQPSTSV CLGVLAALLPAILMLIHAVAEMLLPKGNAILKMASFLGNPLIAMLLGVLFAGASLVLVRGGDAGQLRESLGKSLKPIASI IMIIAGGGAFQELLTSAKVGDAIVHLTQQSAFPPLILGWLIAMLLSVSTGSATVGIVGAAGLLAPLAGADPGLNLPLLAL SIGCGSLFFNYANHAGFWMVKESFGMTMGEATKTISVVQSIVAVVGLIVVLMLNAVVTVT
Specific function: Transport Of Gluconate And L-Idonate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=443, Percent_Identity=37.9232505643341, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1790716, Length=435, Percent_Identity=36.7816091954023, Blast_Score=285, Evalue=4e-78, Organism=Escherichia coli, GI2367370, Length=431, Percent_Identity=34.1067285382831, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI1788707, Length=448, Percent_Identity=31.4732142857143, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI1790776, Length=437, Percent_Identity=29.0617848970252, Blast_Score=201, Evalue=7e-53, Organism=Escherichia coli, GI48994939, Length=448, Percent_Identity=32.8125, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1789097, Length=464, Percent_Identity=29.7413793103448, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47570; Mature: 47439
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLDIDLLLTALVSVLVLVGLIVSRLKMHPLLALLVVSVGVGFATSMEPEAIVSHVMTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC AGKTLGAVGVVIALGAMLGKILADAGVTEQIAEVILKRTSDRMIPWAMMMVAFVIGIPMF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGLVIMLPLIFSVARKLESQARFKGSAYVYVGVPVIAALAAMHGMVPPHPGPLTAIAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHH LKTSVGPTMLYGFLAAIPAMILGGPLYGAFISPRMSTRPDQVLLDQFTLAEKADDQPSTS HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH VCLGVLAALLPAILMLIHAVAEMLLPKGNAILKMASFLGNPLIAMLLGVLFAGASLVLVR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEE GGDAGQLRESLGKSLKPIASIIMIIAGGGAFQELLTSAKVGDAIVHLTQQSAFPPLILGW CCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LIAMLLSVSTGSATVGIVGAAGLLAPLAGADPGLNLPLLALSIGCGSLFFNYANHAGFWM HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE VKESFGMTMGEATKTISVVQSIVAVVGLIVVLMLNAVVTVT EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPLDIDLLLTALVSVLVLVGLIVSRLKMHPLLALLVVSVGVGFATSMEPEAIVSHVMTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC AGKTLGAVGVVIALGAMLGKILADAGVTEQIAEVILKRTSDRMIPWAMMMVAFVIGIPMF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGLVIMLPLIFSVARKLESQARFKGSAYVYVGVPVIAALAAMHGMVPPHPGPLTAIAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHH LKTSVGPTMLYGFLAAIPAMILGGPLYGAFISPRMSTRPDQVLLDQFTLAEKADDQPSTS HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH VCLGVLAALLPAILMLIHAVAEMLLPKGNAILKMASFLGNPLIAMLLGVLFAGASLVLVR HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEE GGDAGQLRESLGKSLKPIASIIMIIAGGGAFQELLTSAKVGDAIVHLTQQSAFPPLILGW CCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LIAMLLSVSTGSATVGIVGAAGLLAPLAGADPGLNLPLLALSIGCGSLFFNYANHAGFWM HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE VKESFGMTMGEATKTISVVQSIVAVVGLIVVLMLNAVVTVT EHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: gluconate [Periplasm]; Proton [Periplasm]; L-idonate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] Proton [Periplasm] + L-idonate [Periplasm] = L-idonate [Cytoplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]