| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aofH [H]
Identifier: 77458967
GI number: 77458967
Start: 3158821
End: 3160293
Strand: Reverse
Name: aofH [H]
Synonym: Pfl01_2742
Alternate gene names: 77458967
Gene position: 3160293-3158821 (Counterclockwise)
Preceding gene: 77458968
Following gene: 77458966
Centisome position: 49.09
GC content: 61.71
Gene sequence:
>1473_bases ATGAGTACTGACGCCCCTCCCGATCTGAAGCGAAGACAATTACTCAAACTGGCCGGTGCAACCGCCGCCGTAGGATCGAT CGGTTTGAACCTTGGCCTGGCCAATGCCGCCGATGCGCTGCAAAAGGACAGTTCCGACGATGTATTTGATGTGGTGATCA TCGGTGCCGGCCTGGCTGGTTTGACCGCCGCCCGTGATCTGCATCTGGCAGGCTGTGAGTCGCTGCTGGTGCTTGAAGCG CGTGATCGTGTCGGCGGCCGCACCCTCAATCATGACTTGGGCTCCGGCTACATCTCCGAAGCCGGAGGTCAGTGGATCGG TCCAGGACAAACCGCCGTAGCGGATCTGGCCCGTGAGCTTGAGGTCGGCACCTTTCCCAGTTTCTATGACGGGGAAACCG TGATCCTCGGGGGCGATGGACGTGTCGCTGTCGATTTGAAAGGCACCTTCGGTACCGACGAAAGCGTCTCGGCAAAACTC AGCGAGCTGTCGCGTGATGTGCCGTGCGGTGCGCCATGGAAATCCCCCAGGGTGGCCGAACTGGACAAGCTCTCGGCGGG CGACTGGCTCGCTCAGCAAAACATCAAGCCGGAAGATCGCGCAGGGTGGAATGCCAGCTTCCTCCTGACCTGCGGTGTCA CGCCGGCGAAGATGGGCTTCTTGCATTTTCTGTCGATGATCAATTCGGCCGGCAGCGAATACATGCGGCTCGATTCGATC AAGGACAGCGCGCAAGGCACGCGGATCGTCGGCGGTTCACAGGTTCTCAGCAGCAAAATGGCGCAATTGTTGGGCGACAG GGTTCGCTTGTCGTGCCCAGTGCGCAAAATTGCTGACTGGAACCGCGACATCGTCAGACTGCAAACGGATCAGGGCGAGA TCCGCGCCCGCCGGGTGATCATGGCGATTCATCCCGCGCTGTGCCAACGCCTGCAATTCGATCCACCGCTGCCCGAAGCT CGCGCCGCCCTGCAGCGGGCCTGGCCAGCGCACTCGCCGGCACGCAAGACCGCAATGGTTTACCCGCGGCCTTTCTGGCG TGACAAGGGCTTGAACGGCCACATCATTCAGGTCGGTGGGCCAGTCATCTGGGCCTACGACAACTCGCCGCCAAACGGCG AAATCGGCGTGATCAATGCATTCATTCTGAATGCCGCAGCCCCCACCGACCCCGAAGCCGCGAAGCGTGTGCAGACCGAA ATCTATGCACGCGCCCTGGGGGACGCAGCGCTTGAGCCGGTTTCCTACCACGATCACGACTGGGCGCATTTCGACCCGTG GACCATCACGTGCGTGTCGCCGATTCCTCCCGGTTTCTGGTCGACACATGGCGAGGCACTGCGTCCGCCGTGCGGCAATC TGTTCTGGTCGGGCACCGAAACCGCTGACATCTGGGCAGGTTACATGGACGGTGCCGTGCGCGCCGGACGCCATAGCGCC TTGCAGGTGCTCAACGCGTTACGTCGGGCATAG
Upstream 100 bases:
>100_bases CAAACGAATGTTTGCGTTCTCGTTACCACTTTTTTACTGCCGCACCCACGCTCGGCCACGGGCGTTCAATCCAACAATAA CGTGATGTGAGGCATCGAAC
Downstream 100 bases:
>100_bases GAGGCGGCAATGAAAAAAAACATAGCGCTTGGCGTCATCGCGCTCATTGCGGTGCTGGTGGTGGTTTTCGGCCGTGATCT GCTCGACCTGTATCGGCTGC
Product: twin-arginine translocation pathway signal protein
Products: RCHO; NH3; H2O2
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MSTDAPPDLKRRQLLKLAGATAAVGSIGLNLGLANAADALQKDSSDDVFDVVIIGAGLAGLTAARDLHLAGCESLLVLEA RDRVGGRTLNHDLGSGYISEAGGQWIGPGQTAVADLARELEVGTFPSFYDGETVILGGDGRVAVDLKGTFGTDESVSAKL SELSRDVPCGAPWKSPRVAELDKLSAGDWLAQQNIKPEDRAGWNASFLLTCGVTPAKMGFLHFLSMINSAGSEYMRLDSI KDSAQGTRIVGGSQVLSSKMAQLLGDRVRLSCPVRKIADWNRDIVRLQTDQGEIRARRVIMAIHPALCQRLQFDPPLPEA RAALQRAWPAHSPARKTAMVYPRPFWRDKGLNGHIIQVGGPVIWAYDNSPPNGEIGVINAFILNAAAPTDPEAAKRVQTE IYARALGDAALEPVSYHDHDWAHFDPWTITCVSPIPPGFWSTHGEALRPPCGNLFWSGTETADIWAGYMDGAVRAGRHSA LQVLNALRRA
Sequences:
>Translated_490_residues MSTDAPPDLKRRQLLKLAGATAAVGSIGLNLGLANAADALQKDSSDDVFDVVIIGAGLAGLTAARDLHLAGCESLLVLEA RDRVGGRTLNHDLGSGYISEAGGQWIGPGQTAVADLARELEVGTFPSFYDGETVILGGDGRVAVDLKGTFGTDESVSAKL SELSRDVPCGAPWKSPRVAELDKLSAGDWLAQQNIKPEDRAGWNASFLLTCGVTPAKMGFLHFLSMINSAGSEYMRLDSI KDSAQGTRIVGGSQVLSSKMAQLLGDRVRLSCPVRKIADWNRDIVRLQTDQGEIRARRVIMAIHPALCQRLQFDPPLPEA RAALQRAWPAHSPARKTAMVYPRPFWRDKGLNGHIIQVGGPVIWAYDNSPPNGEIGVINAFILNAAAPTDPEAAKRVQTE IYARALGDAALEPVSYHDHDWAHFDPWTITCVSPIPPGFWSTHGEALRPPCGNLFWSGTETADIWAGYMDGAVRAGRHSA LQVLNALRRA >Mature_489_residues STDAPPDLKRRQLLKLAGATAAVGSIGLNLGLANAADALQKDSSDDVFDVVIIGAGLAGLTAARDLHLAGCESLLVLEAR DRVGGRTLNHDLGSGYISEAGGQWIGPGQTAVADLARELEVGTFPSFYDGETVILGGDGRVAVDLKGTFGTDESVSAKLS ELSRDVPCGAPWKSPRVAELDKLSAGDWLAQQNIKPEDRAGWNASFLLTCGVTPAKMGFLHFLSMINSAGSEYMRLDSIK DSAQGTRIVGGSQVLSSKMAQLLGDRVRLSCPVRKIADWNRDIVRLQTDQGEIRARRVIMAIHPALCQRLQFDPPLPEAR AALQRAWPAHSPARKTAMVYPRPFWRDKGLNGHIIQVGGPVIWAYDNSPPNGEIGVINAFILNAAAPTDPEAAKRVQTEI YARALGDAALEPVSYHDHDWAHFDPWTITCVSPIPPGFWSTHGEALRPPCGNLFWSGTETADIWAGYMDGAVRAGRHSAL QVLNALRRA
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI4557735, Length=470, Percent_Identity=30.8510638297872, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI38202207, Length=457, Percent_Identity=32.8227571115974, Blast_Score=206, Evalue=6e-53, Organism=Drosophila melanogaster, GI21355313, Length=77, Percent_Identity=45.4545454545455, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: 1.4.3.4
Molecular weight: Translated: 52657; Mature: 52526
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDAPPDLKRRQLLKLAGATAAVGSIGLNLGLANAADALQKDSSDDVFDVVIIGAGLAG CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCHHH LTAARDLHLAGCESLLVLEARDRVGGRTLNHDLGSGYISEAGGQWIGPGQTAVADLAREL HHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH EVGTFPSFYDGETVILGGDGRVAVDLKGTFGTDESVSAKLSELSRDVPCGAPWKSPRVAE CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH LDKLSAGDWLAQQNIKPEDRAGWNASFLLTCGVTPAKMGFLHFLSMINSAGSEYMRLDSI HHHCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHEEHHHH KDSAQGTRIVGGSQVLSSKMAQLLGDRVRLSCPVRKIADWNRDIVRLQTDQGEIRARRVI HCCCCCCEEECHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEECCCCHHHHHHHH MAIHPALCQRLQFDPPLPEARAALQRAWPAHSPARKTAMVYPRPFWRDKGLNGHIIQVGG HHHCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECC PVIWAYDNSPPNGEIGVINAFILNAAAPTDPEAAKRVQTEIYARALGDAALEPVSYHDHD EEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WAHFDPWTITCVSPIPPGFWSTHGEALRPPCGNLFWSGTETADIWAGYMDGAVRAGRHSA CCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHH LQVLNALRRA HHHHHHHHCC >Mature Secondary Structure STDAPPDLKRRQLLKLAGATAAVGSIGLNLGLANAADALQKDSSDDVFDVVIIGAGLAG CCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEECCCHHH LTAARDLHLAGCESLLVLEARDRVGGRTLNHDLGSGYISEAGGQWIGPGQTAVADLAREL HHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH EVGTFPSFYDGETVILGGDGRVAVDLKGTFGTDESVSAKLSELSRDVPCGAPWKSPRVAE CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH LDKLSAGDWLAQQNIKPEDRAGWNASFLLTCGVTPAKMGFLHFLSMINSAGSEYMRLDSI HHHCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHEEHHHH KDSAQGTRIVGGSQVLSSKMAQLLGDRVRLSCPVRKIADWNRDIVRLQTDQGEIRARRVI HCCCCCCEEECHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEECCCCHHHHHHHH MAIHPALCQRLQFDPPLPEARAALQRAWPAHSPARKTAMVYPRPFWRDKGLNGHIIQVGG HHHCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECC PVIWAYDNSPPNGEIGVINAFILNAAAPTDPEAAKRVQTEIYARALGDAALEPVSYHDHD EEEEEECCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WAHFDPWTITCVSPIPPGFWSTHGEALRPPCGNLFWSGTETADIWAGYMDGAVRAGRHSA CCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHH LQVLNALRRA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RCH2NH2; H2O; O2
Specific reaction: RCH2NH2 + H2O + O2 = RCHO + NH3 + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]