| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458768
Identifier: 77458768
GI number: 77458768
Start: 2909000
End: 2909998
Strand: Reverse
Name: 77458768
Synonym: Pfl01_2543
Alternate gene names: NA
Gene position: 2909998-2909000 (Counterclockwise)
Preceding gene: 77458769
Following gene: 77458767
Centisome position: 45.2
GC content: 67.17
Gene sequence:
>999_bases ATGGACTTGTCCGCCTATCTCTCACGGCACGCCAGGGACTACCGCGACACGGCTGCTCTTGGTCTGTGTCTGCGGCAAAT GGTCGAAGCCGGCCTCGACCGTCTGCCACTGCCCGGCAGCGGTCGTACGCTGGAGCGCTGGCAACGGCTGTCCGAGGTCG GCGGGCATGATCTGGGGCTGTGCAAACTCTACGAAGGCCATACCGATGCCTTGGCGATCATCGAGCAACTCGGTGGCTCG CCGACGCCCGGCAGTACGTGGGGCATGTGGGCGGCCGAACCACCGCAGGCGCGGGTTCGGGTCAGCCGTTCGGGGCAACT GGTGCGGTTGAACGGGCGCAAGGCCTGGTGTTCCGGGGCGGCGGTGCTCAGTCACGCCCTGCTCACGGCATGGGATGAGG ACGATCGTCAGCAACTGGTGGCCGTGGCCCTCGATCAACCGGGCGTCAGCGTGACCGATCAAGGCTGGCAAGCGGTCGGC ATGGCGGCCACCGGCAGCGTCGAGGTGCTGTTCGATGAAGTCGAGGCCCAGGCGATTGGTGAACCCGGCGACTACCTGCA ACGGCCGGGTTTCTGGCACGGCGGAATCGGAATCGCCGCGTGCTGGTACGGCGCCGCGAGGGAGATTGGCGAACGCTTGC GCCTGCACTGTGCGCGGCGTGAAGAACCCCACGCGCTGGCCAGTCTCGGCGCCGTCGACAGTGCCTTGCACGCCGCCGCC CAAGTGCTGCGTGTCAGTGCCCTGGACATCGACAGCAATCCCCACACCAACGCCGAATTGCTGGCTCGCCGCGTACGGGC CGTGGTCGAGGACGCCGCTGAACAGGTGATCCGCGAGACCGGTCGGGCACTTGGGGCCGGGCCGTTCTGCAAGGATCCGC ACTTCGCCCGGCTGGTGGCCGATTTGCCGGTGTATCTGCGTCAGAGCCACGCTGAACGCGATCTGGCAGCACTGGGCCGA TTGATTGCGCAGCACGCACGCGAGGGTTGGGCCCTATGA
Upstream 100 bases:
>100_bases TCGATCCGTGGCCAGGAGCGTTTCGAGTTCGGTCACGAGTACTCGGTCACCGGACGCTCGCTGCTGCTGTTTGAACTGCA ACGTGAAGAAGAGGACTGAC
Downstream 100 bases:
>100_bases AGCGCAATCCGATCGTCGGCGAAGGAACCTCCCTCCACGAATGGCAGGGCTCACGCCATCTGGCAGCGGTGGACAGCATC GACATTCTCGATTTGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-CoA Dehydrogenase-Related Protein; Acyl-CoA Dehydrogenase/Methyltransferase; Dehydrogenase; Acyl-CoA Dehydrogenase Domain Protein; Cyl-CoA Dehydrogenase.; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase Type 2 Domain; Exported Acyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase Type 2 Domain Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MDLSAYLSRHARDYRDTAALGLCLRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGLCKLYEGHTDALAIIEQLGGS PTPGSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGAAVLSHALLTAWDEDDRQQLVAVALDQPGVSVTDQGWQAVG MAATGSVEVLFDEVEAQAIGEPGDYLQRPGFWHGGIGIAACWYGAAREIGERLRLHCARREEPHALASLGAVDSALHAAA QVLRVSALDIDSNPHTNAELLARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVADLPVYLRQSHAERDLAALGR LIAQHAREGWAL
Sequences:
>Translated_332_residues MDLSAYLSRHARDYRDTAALGLCLRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGLCKLYEGHTDALAIIEQLGGS PTPGSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGAAVLSHALLTAWDEDDRQQLVAVALDQPGVSVTDQGWQAVG MAATGSVEVLFDEVEAQAIGEPGDYLQRPGFWHGGIGIAACWYGAAREIGERLRLHCARREEPHALASLGAVDSALHAAA QVLRVSALDIDSNPHTNAELLARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVADLPVYLRQSHAERDLAALGR LIAQHAREGWAL >Mature_332_residues MDLSAYLSRHARDYRDTAALGLCLRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGLCKLYEGHTDALAIIEQLGGS PTPGSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGAAVLSHALLTAWDEDDRQQLVAVALDQPGVSVTDQGWQAVG MAATGSVEVLFDEVEAQAIGEPGDYLQRPGFWHGGIGIAACWYGAAREIGERLRLHCARREEPHALASLGAVDSALHAAA QVLRVSALDIDSNPHTNAELLARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVADLPVYLRQSHAERDLAALGR LIAQHAREGWAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35909; Mature: 35909
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSAYLSRHARDYRDTAALGLCLRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE CKLYEGHTDALAIIEQLGGSPTPGSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGA EEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEECCCHHHHHHH AVLSHALLTAWDEDDRQQLVAVALDQPGVSVTDQGWQAVGMAATGSVEVLFDEVEAQAIG HHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEECEECCCCHHHHHHHHHHHHCC EPGDYLQRPGFWHGGIGIAACWYGAAREIGERLRLHCARREEPHALASLGAVDSALHAAA CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QVLRVSALDIDSNPHTNAELLARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVA HHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLPVYLRQSHAERDLAALGRLIAQHAREGWAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLSAYLSRHARDYRDTAALGLCLRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE CKLYEGHTDALAIIEQLGGSPTPGSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGA EEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEECCCHHHHHHH AVLSHALLTAWDEDDRQQLVAVALDQPGVSVTDQGWQAVGMAATGSVEVLFDEVEAQAIG HHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEECEECCCCHHHHHHHHHHHHCC EPGDYLQRPGFWHGGIGIAACWYGAAREIGERLRLHCARREEPHALASLGAVDSALHAAA CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QVLRVSALDIDSNPHTNAELLARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVA HHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH DLPVYLRQSHAERDLAALGRLIAQHAREGWAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA