Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458742

Identifier: 77458742

GI number: 77458742

Start: 2873883

End: 2874878

Strand: Reverse

Name: 77458742

Synonym: Pfl01_2517

Alternate gene names: NA

Gene position: 2874878-2873883 (Counterclockwise)

Preceding gene: 77458743

Following gene: 77458737

Centisome position: 44.65

GC content: 59.94

Gene sequence:

>996_bases
ATGAGGACAAGAGTGATGTTTTGCGTCGGGATCTTCTTCGCGCTGGTGATCATGGGGCTGACGGGCGCGACCCGCCCTTT
CCTGCAGCTCGATCTCTGGCTGGACGGGCGCGATGCGCCGATCACCGCCCAGGCCAATGCGCTGAGCCCGGTGATTGCCT
GTATCAACCGGATCGACGTGCAATGGCGAGTGGCCTACGACCGTTACAAGCATCCCCAGCCACGTCCACCGGTCGATGAA
CGATGGTTCGCCAGCCTGAGCGATTTCGAGGACAGTGACGCGCTCAACGTGCGAGACATCCAGCGCGATGTCTGCTCCCA
AGGTTTTACCGAAAAACTCGAACTGCTGGCTTATCGACCCGAGCTGGCGCAAGTAGCCAATGAATATGCGTTGGCGCTGA
ATCGTGTGACGACAACGCTTCCGCCTCAACGGTTTTACCGGGAAGCGAGCTTCATCTCCTCATCGCAACAGCCGTCCGCT
GAAGAAAAGGCAATGATCGAGCGCGTCTCGCAGGATTACGCCAGTGCCTCGACACGCCTCAGGCAAGCCCTCCTGCCGCT
GGACGCCGCGCAGCGGCCCGAACAGCTCAGGCTGCTGGAAGCACGCCAGGGCCGGGACGTTCATTGGTATTTGCTGGCCT
ATATGATCCAGGCCCGGGAAACTGTCGATGTGCTCGAAGCGGCCATGAAAAATCGCACGCTGACCCCGCAATTGCTGGCG
GACACCACCGCGAAGCTGCAACAGGCCTGGAATCGTCGGGAGCCCTTCCTGAGCTCGCAAACGAGCGGTTTCCAGAACAA
GACCGATGCTGCGCGGGACCTGTGGTTGTACATTGGCAAGCCCGGGACCGAATACCTCGACGCGCTGTATACCCTGCAAA
AGGACTGGCGGAATCACGCCGAGCCAAAACGGCTGAGTGATGATTTCTACGCCATCAACCGCCGCTACGATGGACTGCTC
AGCTACTACAACCGCCGAGCCAGAGCCGAGTTCTGA

Upstream 100 bases:

>100_bases
AACCCTGGACCGAACGCCTGTGCAGTCGCTTGCCGGCCACCACCGCCGAATGCAGCGCACCGGCCACCGTCGAACAGTGG
TACGGCAAGGAGGCCCGCCC

Downstream 100 bases:

>100_bases
TGACAGCCAGCCGGATCGCCCGCCATGAGCGATCCGGCAGCCAGCCTTACTTGGCCTTGAGCTTGAGGTAGGACTGATGC
AGATCCGAGGCCCAGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRTRVMFCVGIFFALVIMGLTGATRPFLQLDLWLDGRDAPITAQANALSPVIACINRIDVQWRVAYDRYKHPQPRPPVDE
RWFASLSDFEDSDALNVRDIQRDVCSQGFTEKLELLAYRPELAQVANEYALALNRVTTTLPPQRFYREASFISSSQQPSA
EEKAMIERVSQDYASASTRLRQALLPLDAAQRPEQLRLLEARQGRDVHWYLLAYMIQARETVDVLEAAMKNRTLTPQLLA
DTTAKLQQAWNRREPFLSSQTSGFQNKTDAARDLWLYIGKPGTEYLDALYTLQKDWRNHAEPKRLSDDFYAINRRYDGLL
SYYNRRARAEF

Sequences:

>Translated_331_residues
MRTRVMFCVGIFFALVIMGLTGATRPFLQLDLWLDGRDAPITAQANALSPVIACINRIDVQWRVAYDRYKHPQPRPPVDE
RWFASLSDFEDSDALNVRDIQRDVCSQGFTEKLELLAYRPELAQVANEYALALNRVTTTLPPQRFYREASFISSSQQPSA
EEKAMIERVSQDYASASTRLRQALLPLDAAQRPEQLRLLEARQGRDVHWYLLAYMIQARETVDVLEAAMKNRTLTPQLLA
DTTAKLQQAWNRREPFLSSQTSGFQNKTDAARDLWLYIGKPGTEYLDALYTLQKDWRNHAEPKRLSDDFYAINRRYDGLL
SYYNRRARAEF
>Mature_331_residues
MRTRVMFCVGIFFALVIMGLTGATRPFLQLDLWLDGRDAPITAQANALSPVIACINRIDVQWRVAYDRYKHPQPRPPVDE
RWFASLSDFEDSDALNVRDIQRDVCSQGFTEKLELLAYRPELAQVANEYALALNRVTTTLPPQRFYREASFISSSQQPSA
EEKAMIERVSQDYASASTRLRQALLPLDAAQRPEQLRLLEARQGRDVHWYLLAYMIQARETVDVLEAAMKNRTLTPQLLA
DTTAKLQQAWNRREPFLSSQTSGFQNKTDAARDLWLYIGKPGTEYLDALYTLQKDWRNHAEPKRLSDDFYAINRRYDGLL
SYYNRRARAEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38268; Mature: 38268

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRVMFCVGIFFALVIMGLTGATRPFLQLDLWLDGRDAPITAQANALSPVIACINRIDV
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
QWRVAYDRYKHPQPRPPVDERWFASLSDFEDSDALNVRDIQRDVCSQGFTEKLELLAYRP
EEEEEHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCH
ELAQVANEYALALNRVTTTLPPQRFYREASFISSSQQPSAEEKAMIERVSQDYASASTRL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQALLPLDAAQRPEQLRLLEARQGRDVHWYLLAYMIQARETVDVLEAAMKNRTLTPQLLA
HHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DTTAKLQQAWNRREPFLSSQTSGFQNKTDAARDLWLYIGKPGTEYLDALYTLQKDWRNHA
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCC
EPKRLSDDFYAINRRYDGLLSYYNRRARAEF
CCHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTRVMFCVGIFFALVIMGLTGATRPFLQLDLWLDGRDAPITAQANALSPVIACINRIDV
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
QWRVAYDRYKHPQPRPPVDERWFASLSDFEDSDALNVRDIQRDVCSQGFTEKLELLAYRP
EEEEEHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCH
ELAQVANEYALALNRVTTTLPPQRFYREASFISSSQQPSAEEKAMIERVSQDYASASTRL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQALLPLDAAQRPEQLRLLEARQGRDVHWYLLAYMIQARETVDVLEAAMKNRTLTPQLLA
HHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DTTAKLQQAWNRREPFLSSQTSGFQNKTDAARDLWLYIGKPGTEYLDALYTLQKDWRNHA
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCC
EPKRLSDDFYAINRRYDGLLSYYNRRARAEF
CCHHCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA