| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorB [H]
Identifier: 77458697
GI number: 77458697
Start: 2825873
End: 2828122
Strand: Reverse
Name: iorB [H]
Synonym: Pfl01_2472
Alternate gene names: 77458697
Gene position: 2828122-2825873 (Counterclockwise)
Preceding gene: 77458698
Following gene: 77458696
Centisome position: 43.93
GC content: 63.47
Gene sequence:
>2250_bases ATGAACGTTCGTATCGACCCTTCACAACACGCTTCAGTACTGGATCTGCAGGAACCGATCAATGTGTCGCGCAGACGTTT TCTGACCGGTACCGCCGTCGGCGCACTGGTGCTCGGCTTCGGTCTGCCGCTCGGTGCGACACGGGTACAAGCGGCAGCGG CAGCGACTGCCGAGCGTGGCACCCAAGTCCCGGCGTTTCTCGAAATCCGCCCGGACAACCGCGTGCGTCTGCTCTGCCCG TTCATGGAAGGCGGGCAAGGCACGTTCACCGCCATGGCGCAGATCGTCGGTGAAGAACTGGATGCGGACCCGGCGACCTT CCTGGTCGAAGCAGCGCCGCCCGGAGAAGCCTACGTGGTGATGGAAAACGGCCTGCGCATCACCGGCGGCAGCATGTCGG TGCGCATGAGTTACCCGGTCATGCGTCGCCTCGGCGCCCTCGCCCGCGCCATGCTGTTGCAGGCCGGCGCGCAGCAACTG GGCGTGCCGGTGAGCGAGTTGAGCACCGAGCCGGGCAAGGTCGTGCATGCCAAGTCCGGGCGTTCGTTGGCCTACGGTGA ACTGGCCGAGCGCGCGATGGATCTGCCGGTTCCCGATCCGGCCTCGGTGAAGCTGCGTGATCCGAGCCAGTTCCGCTGGA TCGGCAAACCGGTGAAGCGTCTCGACGCTTACGACAAATCCACCGGCAAGGCGCTGTACAGCATCGATCTGAAAGTCGAC GACATGCTGCATGCCGCCGTTCAACATGCCCCGCGCCTGGGGATGACCGTGGGCAACCTGCGCAACGAAGAGCAGGTCAA GGCGATGAAAGGCGTGCATTCCGTGCATCGTCTGCCGGGCGCCGTGGCGGTGGTCGCCGAGCGCTGGTGGCACGCCAAAC GTGCCGTCGAGGCGATTCAGGTCGACTGGCAAGAGCCGACGGCCGACAGCAAAGTACGGCCGATGCCCGCCGACTTTTCC AGCGATGCCTGGTTCAAGCGCCTCGCTGAAGATAAAAGCCCCGCCAAAGATGATGAACACGAAGGCGATGTGGCTTCGAT TCTCAAGGAAACCAAGACCCGGATTGACGCCACTTACCACAACCAATACCTGAACCACGGACAGCTGGAGCCGCCTTCAG CACTGGCCCGATTCAATCCGGATGGTTCGCTTGAGGTCTGGCTGCCGAATCAGGCGCCGGACATGTTCCGCGCCGATATC GCCAAACGCACCGGGCTCGATCCGTCACGCATCACCTTGCATTCGCCGCTGTTGGGCGGGTTCTTCGGTCGGCATTTCCT CTACGACTCGGCCAGTCCCTACCCTCAGGCCATCGCGCTGGCCAAAGCGGTTGGGCGCCCGGTCAAACTGATCTGGAGTC GCGAAGAAGAGTTCCTGCGTGACGTGCTTCGCCCGGTTGCCGCAGTGAATTTCCGTGCCGCACTGGACAGCGACGGCTGG CCGCTGGCAATCGAAGCGATCAGTGCCACCGAAGGCCCGACCGAAGCCCTCGCCGGCAAACAGGGTGAAAAGCTCGACCC GACGGCGCTCGAAGGGTTGTCAGGCAAGTCCTATGCGATCCCCAACAAGCGCATCGCGCAGATTTACGTCAAAGGCCCGG CGATGCTCGGCTACTGGCGTTCGGTGGGCAATTCCCTCAACGACTTCTTCTATGAATCGTTCCTCGATGAACTGGCCGAC AAAGGGGGCAAAGACCCATTCGAGCTGCGCCTGCATTTGCTGCGTGACAACAAACGCCTGACCACGCTGCTACAAGCGGT GGGTGAACTGTCCGGAGGCTGGAAGCGCGGGCCGTTTACCGCCGAGGATGGCAGCCGACGTGCGCGCGGCGTGGCCATGG CTTCGCCGTTCGGTACCGAGACGGCGGTGATCGCTGAGGTGTCCATCGAGAACGGCCAGGTCAAGGTGCACGACATCTGG CAGGCGATTGATCCGGGCAGCATCGTCAATCCGGCGATTGTCGAGGCTCAGGTGAACGGCGCCGTGGCGTTGGGACTGTC GCAAACGCTGGTCGAGGAAGCCGTGTGGGTGGATGGCAAACCCCGGGCGCGCAACTACGACTTGTACCCGATCCTGCCGC CTGCGCGGATGGCACGGGTGCATGTGCGGGTGGTCGAGAGCGGGGAAAAAATGGGTGGCATTGGTGAACCGCCGTTGCCT GCGGTCGCGCCCGCTGTCGCTAACGCGGTGGCGACGCTGACCGGTCAGCGGGTACGCAGCCTGCCCTTGAGCCGACACAC TTTCACCTGA
Upstream 100 bases:
>100_bases ATGCGCAGATCGAGGCGGCGATGGTCAACCTGTGCCGCTGCGGTACCTACAACGCCATTCATGCCGCCGTGCATGAACTT GCCGGCAAGGGGGACGCGTG
Downstream 100 bases:
>100_bases TCAGCGCCGGAGCGTTCATGAATAACAGCCGATTCGCAAGAACCGCTGGCTGGCTGGCCGTGCCGTGTCTGGTCGCGGCA GGCCTGCTGGCCTGGTATGT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MNVRIDPSQHASVLDLQEPINVSRRRFLTGTAVGALVLGFGLPLGATRVQAAAAATAERGTQVPAFLEIRPDNRVRLLCP FMEGGQGTFTAMAQIVGEELDADPATFLVEAAPPGEAYVVMENGLRITGGSMSVRMSYPVMRRLGALARAMLLQAGAQQL GVPVSELSTEPGKVVHAKSGRSLAYGELAERAMDLPVPDPASVKLRDPSQFRWIGKPVKRLDAYDKSTGKALYSIDLKVD DMLHAAVQHAPRLGMTVGNLRNEEQVKAMKGVHSVHRLPGAVAVVAERWWHAKRAVEAIQVDWQEPTADSKVRPMPADFS SDAWFKRLAEDKSPAKDDEHEGDVASILKETKTRIDATYHNQYLNHGQLEPPSALARFNPDGSLEVWLPNQAPDMFRADI AKRTGLDPSRITLHSPLLGGFFGRHFLYDSASPYPQAIALAKAVGRPVKLIWSREEEFLRDVLRPVAAVNFRAALDSDGW PLAIEAISATEGPTEALAGKQGEKLDPTALEGLSGKSYAIPNKRIAQIYVKGPAMLGYWRSVGNSLNDFFYESFLDELAD KGGKDPFELRLHLLRDNKRLTTLLQAVGELSGGWKRGPFTAEDGSRRARGVAMASPFGTETAVIAEVSIENGQVKVHDIW QAIDPGSIVNPAIVEAQVNGAVALGLSQTLVEEAVWVDGKPRARNYDLYPILPPARMARVHVRVVESGEKMGGIGEPPLP AVAPAVANAVATLTGQRVRSLPLSRHTFT
Sequences:
>Translated_749_residues MNVRIDPSQHASVLDLQEPINVSRRRFLTGTAVGALVLGFGLPLGATRVQAAAAATAERGTQVPAFLEIRPDNRVRLLCP FMEGGQGTFTAMAQIVGEELDADPATFLVEAAPPGEAYVVMENGLRITGGSMSVRMSYPVMRRLGALARAMLLQAGAQQL GVPVSELSTEPGKVVHAKSGRSLAYGELAERAMDLPVPDPASVKLRDPSQFRWIGKPVKRLDAYDKSTGKALYSIDLKVD DMLHAAVQHAPRLGMTVGNLRNEEQVKAMKGVHSVHRLPGAVAVVAERWWHAKRAVEAIQVDWQEPTADSKVRPMPADFS SDAWFKRLAEDKSPAKDDEHEGDVASILKETKTRIDATYHNQYLNHGQLEPPSALARFNPDGSLEVWLPNQAPDMFRADI AKRTGLDPSRITLHSPLLGGFFGRHFLYDSASPYPQAIALAKAVGRPVKLIWSREEEFLRDVLRPVAAVNFRAALDSDGW PLAIEAISATEGPTEALAGKQGEKLDPTALEGLSGKSYAIPNKRIAQIYVKGPAMLGYWRSVGNSLNDFFYESFLDELAD KGGKDPFELRLHLLRDNKRLTTLLQAVGELSGGWKRGPFTAEDGSRRARGVAMASPFGTETAVIAEVSIENGQVKVHDIW QAIDPGSIVNPAIVEAQVNGAVALGLSQTLVEEAVWVDGKPRARNYDLYPILPPARMARVHVRVVESGEKMGGIGEPPLP AVAPAVANAVATLTGQRVRSLPLSRHTFT >Mature_749_residues MNVRIDPSQHASVLDLQEPINVSRRRFLTGTAVGALVLGFGLPLGATRVQAAAAATAERGTQVPAFLEIRPDNRVRLLCP FMEGGQGTFTAMAQIVGEELDADPATFLVEAAPPGEAYVVMENGLRITGGSMSVRMSYPVMRRLGALARAMLLQAGAQQL GVPVSELSTEPGKVVHAKSGRSLAYGELAERAMDLPVPDPASVKLRDPSQFRWIGKPVKRLDAYDKSTGKALYSIDLKVD DMLHAAVQHAPRLGMTVGNLRNEEQVKAMKGVHSVHRLPGAVAVVAERWWHAKRAVEAIQVDWQEPTADSKVRPMPADFS SDAWFKRLAEDKSPAKDDEHEGDVASILKETKTRIDATYHNQYLNHGQLEPPSALARFNPDGSLEVWLPNQAPDMFRADI AKRTGLDPSRITLHSPLLGGFFGRHFLYDSASPYPQAIALAKAVGRPVKLIWSREEEFLRDVLRPVAAVNFRAALDSDGW PLAIEAISATEGPTEALAGKQGEKLDPTALEGLSGKSYAIPNKRIAQIYVKGPAMLGYWRSVGNSLNDFFYESFLDELAD KGGKDPFELRLHLLRDNKRLTTLLQAVGELSGGWKRGPFTAEDGSRRARGVAMASPFGTETAVIAEVSIENGQVKVHDIW QAIDPGSIVNPAIVEAQVNGAVALGLSQTLVEEAVWVDGKPRARNYDLYPILPPARMARVHVRVVESGEKMGGIGEPPLP AVAPAVANAVATLTGQRVRSLPLSRHTFT
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=406, Percent_Identity=23.1527093596059, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 81287; Mature: 81287
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRIDPSQHASVLDLQEPINVSRRRFLTGTAVGALVLGFGLPLGATRVQAAAAATAERG CCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC TQVPAFLEIRPDNRVRLLCPFMEGGQGTFTAMAQIVGEELDADPATFLVEAAPPGEAYVV CCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE MENGLRITGGSMSVRMSYPVMRRLGALARAMLLQAGAQQLGVPVSELSTEPGKVVHAKSG EECCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCCCEEEECCC RSLAYGELAERAMDLPVPDPASVKLRDPSQFRWIGKPVKRLDAYDKSTGKALYSIDLKVD CCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH DMLHAAVQHAPRLGMTVGNLRNEEQVKAMKGVHSVHRLPGAVAVVAERWWHAKRAVEAIQ HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHE VDWQEPTADSKVRPMPADFSSDAWFKRLAEDKSPAKDDEHEGDVASILKETKTRIDATYH ECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NQYLNHGQLEPPSALARFNPDGSLEVWLPNQAPDMFRADIAKRTGLDPSRITLHSPLLGG HHHHCCCCCCCCHHHHEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCHHHH FFGRHFLYDSASPYPQAIALAKAVGRPVKLIWSREEEFLRDVLRPVAAVNFRAALDSDGW HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEECCCCC PLAIEAISATEGPTEALAGKQGEKLDPTALEGLSGKSYAIPNKRIAQIYVKGPAMLGYWR EEEEEEEECCCCCHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCEEEEEEECCHHHHHHH SVGNSLNDFFYESFLDELADKGGKDPFELRLHLLRDNKRLTTLLQAVGELSGGWKRGPFT HHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC AEDGSRRARGVAMASPFGTETAVIAEVSIENGQVKVHDIWQAIDPGSIVNPAIVEAQVNG CCCCCCHHCCEEEECCCCCCEEEEEEEEECCCEEEEEEHHHHCCCCCCCCCCEEEEECCC AVALGLSQTLVEEAVWVDGKPRARNYDLYPILPPARMARVHVRVVESGEKMGGIGEPPLP EEEECHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHEEEEEEECCCCCCCCCCCCCC AVAPAVANAVATLTGQRVRSLPLSRHTFT HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNVRIDPSQHASVLDLQEPINVSRRRFLTGTAVGALVLGFGLPLGATRVQAAAAATAERG CCEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC TQVPAFLEIRPDNRVRLLCPFMEGGQGTFTAMAQIVGEELDADPATFLVEAAPPGEAYVV CCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE MENGLRITGGSMSVRMSYPVMRRLGALARAMLLQAGAQQLGVPVSELSTEPGKVVHAKSG EECCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCCCEEEECCC RSLAYGELAERAMDLPVPDPASVKLRDPSQFRWIGKPVKRLDAYDKSTGKALYSIDLKVD CCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH DMLHAAVQHAPRLGMTVGNLRNEEQVKAMKGVHSVHRLPGAVAVVAERWWHAKRAVEAIQ HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHE VDWQEPTADSKVRPMPADFSSDAWFKRLAEDKSPAKDDEHEGDVASILKETKTRIDATYH ECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NQYLNHGQLEPPSALARFNPDGSLEVWLPNQAPDMFRADIAKRTGLDPSRITLHSPLLGG HHHHCCCCCCCCHHHHEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCHHHH FFGRHFLYDSASPYPQAIALAKAVGRPVKLIWSREEEFLRDVLRPVAAVNFRAALDSDGW HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEECCCCC PLAIEAISATEGPTEALAGKQGEKLDPTALEGLSGKSYAIPNKRIAQIYVKGPAMLGYWR EEEEEEEECCCCCHHHHCCCCCCCCCCHHHCCCCCCCEECCCCCEEEEEEECCHHHHHHH SVGNSLNDFFYESFLDELADKGGKDPFELRLHLLRDNKRLTTLLQAVGELSGGWKRGPFT HHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC AEDGSRRARGVAMASPFGTETAVIAEVSIENGQVKVHDIWQAIDPGSIVNPAIVEAQVNG CCCCCCHHCCEEEECCCCCCEEEEEEEEECCCEEEEEEHHHHCCCCCCCCCCEEEEECCC AVALGLSQTLVEEAVWVDGKPRARNYDLYPILPPARMARVHVRVVESGEKMGGIGEPPLP EEEECHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHEEEEEEECCCCCCCCCCCCCC AVAPAVANAVATLTGQRVRSLPLSRHTFT HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]