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The map label for this gene is yedU [C]

Identifier: 77458660

GI number: 77458660

Start: 2788352

End: 2789191

Strand: Reverse

Name: yedU [C]

Synonym: Pfl01_2435

Alternate gene names: 77458660

Gene position: 2789191-2788352 (Counterclockwise)

Preceding gene: 77458662

Following gene: 77458659

Centisome position: 43.32

GC content: 59.52

Gene sequence:

>840_bases
ATGCGCTCAATGACACGTCTTGCTTTCGCCCTGTCTCTCTCCGTTGCCGCGTTGAACGCCCAGGCGGCCAATGTGCTGGT
GGTGCTGTCGGACTCCGATCATCTCGATCTGAAGGACGGCAAGGTCTTCAGCACCGGTTTCTACCTCAACGAACTGATGC
AACCGGTCAAGCTGCTGCTCGATGCCGGCCACACCGTGACCTTCGCCACCCCGACCGGCAAGGCGCCGACGCTGGATCGC
TCCTCCGACGACAAGATGTATTTCAACAATGACGTGGCAGCCTTGCAGACCCACAAGGCGCTGCTGGAACAACTGAAGAT
CACCTCGCCCGGTGAATCGCCGGTTATCAGCCTGTCGCGGGTGGAGCAAGTCGGCTACGAGCATTTCGATGCCGTCTACA
TTCCGGGTGGCCACGCACCGATGCAGGATCTGCTGCACAGCCAGGCGCTGGGCAAACTGCTGAACAACTTCCATCAAACA
GGCAAAACCACAGCCCTTGTGTGCCACGGCCCGATTGCACTGCTGTCGACCCTGACGGATCCGACCGCATTCACCCGCCA
ACTGGAAACCGGCAAAGCCACGACGGCAAACAACTGGACGTATGCCGGCTACACATTCACGGTCATCAGCAATCAGGAAG
AAGAAATCGCCAAAGGTCTGTTGAACGGCGGTGCGATGAAGTTCTATCCGCAGACGGCACTGGAGAAGGCTGGCGGTGTT
TTCAGCAGTAACACGGCGCCGTGGGCCAGCCACGTAGTGGTTGATCGCGAACTGGTCACCGGACAGAACCCGGCGTCGGC
CCTGGCCGTGGGCAAGACCCTCGTTGACCGCTTGAAGTGA

Upstream 100 bases:

>100_bases
TTGATCTCCAGAGAACAAATGCTTTGCTGTGGCGCGAGTTTATCGCTGCCATAAGCATCAATACAGTGAGCCGCACTTTC
CTTCATCTTCTGGAGTCGCC

Downstream 100 bases:

>100_bases
TCTCGGCGCCCTCGCACTTTCACCGTTTCGTCTAACCTGACGTTGCACCCGACGATGATTGCCCATCGACGGGTGCATCG
ACCTTGATGCCCACGAAACG

Product: ThiJ/PfpI

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Transcriptional Regulator; Amidotransferase; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; DJ-1/PfpI/ThiJ Superfamily Protein; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; Type 1 Glutamine Amidotransferase; ThiJ Protein; NonF Protein; ThiJ/PfpI Family Intracellular Protease; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Chaperone HchA; Chaperone; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; Protease/Amidase; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRSMTRLAFALSLSVAALNAQAANVLVVLSDSDHLDLKDGKVFSTGFYLNELMQPVKLLLDAGHTVTFATPTGKAPTLDR
SSDDKMYFNNDVAALQTHKALLEQLKITSPGESPVISLSRVEQVGYEHFDAVYIPGGHAPMQDLLHSQALGKLLNNFHQT
GKTTALVCHGPIALLSTLTDPTAFTRQLETGKATTANNWTYAGYTFTVISNQEEEIAKGLLNGGAMKFYPQTALEKAGGV
FSSNTAPWASHVVVDRELVTGQNPASALAVGKTLVDRLK

Sequences:

>Translated_279_residues
MRSMTRLAFALSLSVAALNAQAANVLVVLSDSDHLDLKDGKVFSTGFYLNELMQPVKLLLDAGHTVTFATPTGKAPTLDR
SSDDKMYFNNDVAALQTHKALLEQLKITSPGESPVISLSRVEQVGYEHFDAVYIPGGHAPMQDLLHSQALGKLLNNFHQT
GKTTALVCHGPIALLSTLTDPTAFTRQLETGKATTANNWTYAGYTFTVISNQEEEIAKGLLNGGAMKFYPQTALEKAGGV
FSSNTAPWASHVVVDRELVTGQNPASALAVGKTLVDRLK
>Mature_279_residues
MRSMTRLAFALSLSVAALNAQAANVLVVLSDSDHLDLKDGKVFSTGFYLNELMQPVKLLLDAGHTVTFATPTGKAPTLDR
SSDDKMYFNNDVAALQTHKALLEQLKITSPGESPVISLSRVEQVGYEHFDAVYIPGGHAPMQDLLHSQALGKLLNNFHQT
GKTTALVCHGPIALLSTLTDPTAFTRQLETGKATTANNWTYAGYTFTVISNQEEEIAKGLLNGGAMKFYPQTALEKAGGV
FSSNTAPWASHVVVDRELVTGQNPASALAVGKTLVDRLK

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29972; Mature: 29972

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMTRLAFALSLSVAALNAQAANVLVVLSDSDHLDLKDGKVFSTGFYLNELMQPVKLLL
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
DAGHTVTFATPTGKAPTLDRSSDDKMYFNNDVAALQTHKALLEQLKITSPGESPVISLSR
HCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHH
VEQVGYEHFDAVYIPGGHAPMQDLLHSQALGKLLNNFHQTGKTTALVCHGPIALLSTLTD
HHHHCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCC
PTAFTRQLETGKATTANNWTYAGYTFTVISNQEEEIAKGLLNGGAMKFYPQTALEKAGGV
CHHHHHHHHCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHCCC
FSSNTAPWASHVVVDRELVTGQNPASALAVGKTLVDRLK
CCCCCCCCHHHEEEEHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSMTRLAFALSLSVAALNAQAANVLVVLSDSDHLDLKDGKVFSTGFYLNELMQPVKLLL
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
DAGHTVTFATPTGKAPTLDRSSDDKMYFNNDVAALQTHKALLEQLKITSPGESPVISLSR
HCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHH
VEQVGYEHFDAVYIPGGHAPMQDLLHSQALGKLLNNFHQTGKTTALVCHGPIALLSTLTD
HHHHCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCC
PTAFTRQLETGKATTANNWTYAGYTFTVISNQEEEIAKGLLNGGAMKFYPQTALEKAGGV
CHHHHHHHHCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHCCC
FSSNTAPWASHVVVDRELVTGQNPASALAVGKTLVDRLK
CCCCCCCCHHHEEEEHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA