Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458650

Identifier: 77458650

GI number: 77458650

Start: 2779040

End: 2779399

Strand: Reverse

Name: 77458650

Synonym: Pfl01_2425

Alternate gene names: NA

Gene position: 2779399-2779040 (Counterclockwise)

Preceding gene: 77458651

Following gene: 77458647

Centisome position: 43.17

GC content: 58.89

Gene sequence:

>360_bases
ATGATCAAACCAACACCCAACCCACCCGAAACCGACCCCACTTCCCCCTACGAATCCCCCAACTCCAAAAAACTCCACGA
CGCCGCCGAGCGTGCGCTGGATCACTACCTCTTCCCCGCCGCAGGGATCATGTCGTCCTTGAACGAGCCCGAGCGGATGT
ACCTGGCCAATCCGAAATACAACACCGAATGCCTGCTGGCCAACGCCAGCGAAAACCTCGGTGCAGCCAGTGAGATGCTG
AGCAATTTCGCGGCCACGCTCGATCCCTCGCATCGCAAGACGGCGATCGGTATTACTCAAATCGTGATGATTGCCGAGCT
GGCGGTGAATCAGGCGCTGGATCACGTGGAGGTCGCGTAG

Upstream 100 bases:

>100_bases
GTCTCCTTGTGTCCCGGTCTACCAACCTGCGTATGGCCACCACCCAACGTTTGGTAGCGTGTGGGTGATGGCTCCTGATG
ACGACACAAGGAGTTTCACC

Downstream 100 bases:

>100_bases
CCGTCGTTGACCGCTTTTTCTCCAGCGAGAGTTGCTGAGTCCGTTTTTGCTGCTGGAAACATCCGGCTCAGAAGACGTGG
AATGTAAAAAGCCCGGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MIKPTPNPPETDPTSPYESPNSKKLHDAAERALDHYLFPAAGIMSSLNEPERMYLANPKYNTECLLANASENLGAASEML
SNFAATLDPSHRKTAIGITQIVMIAELAVNQALDHVEVA

Sequences:

>Translated_119_residues
MIKPTPNPPETDPTSPYESPNSKKLHDAAERALDHYLFPAAGIMSSLNEPERMYLANPKYNTECLLANASENLGAASEML
SNFAATLDPSHRKTAIGITQIVMIAELAVNQALDHVEVA
>Mature_119_residues
MIKPTPNPPETDPTSPYESPNSKKLHDAAERALDHYLFPAAGIMSSLNEPERMYLANPKYNTECLLANASENLGAASEML
SNFAATLDPSHRKTAIGITQIVMIAELAVNQALDHVEVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12905; Mature: 12905

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPTPNPPETDPTSPYESPNSKKLHDAAERALDHYLFPAAGIMSSLNEPERMYLANPKY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCC
NTECLLANASENLGAASEMLSNFAATLDPSHRKTAIGITQIVMIAELAVNQALDHVEVA
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKPTPNPPETDPTSPYESPNSKKLHDAAERALDHYLFPAAGIMSSLNEPERMYLANPKY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCC
NTECLLANASENLGAASEMLSNFAATLDPSHRKTAIGITQIVMIAELAVNQALDHVEVA
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA