| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pcbC [H]
Identifier: 77458561
GI number: 77458561
Start: 2693499
End: 2694551
Strand: Direct
Name: pcbC [H]
Synonym: Pfl01_2334
Alternate gene names: 77458561
Gene position: 2693499-2694551 (Clockwise)
Preceding gene: 77458560
Following gene: 77458562
Centisome position: 41.83
GC content: 62.96
Gene sequence:
>1053_bases ATGCCGCACACCTCAAAGATCACCGCATTACCCATCCTCGACCTGTCCCTGCTCGACGGCACGCCGTCGCAACGCCAGGC CTTTCTTGATGACCTGCGCCATGCTGCCCGCGATGTGGGTTTTTTCTACCTGACCGGCCATGGCATCGACGCCGGCCTGC TCGAGCAAGTGCAGGACTACGCACGCCAGTTCTTCGCCTTGCCCGACAGCGAGAAAAACGCCGTCGGCATGATCAATTCG CCGCACTTTCGCGGCTACAACCGCGCCGCTTCCGAGATCACCCGTGGCCAGCCCGATCAGCGTGAGCAATTCGATCTGGG CGCCGAGCGCGACGTCTTGCCGTTGAACGCTGACAGTCCGTTATGGGCGCGGCTGCAAGGGCCGAATCAATGGCCCGGAG CGTTGCCGCAACTCAAGCCGCTGTTGCTCGACTGGCAGCAGGCGATGACCCAAATGTCGCTGCGCCTGCTGCGCGCATTC GCTCAGGCGCTGTCCTTGCCGGAAGACGCTTTCGACCGGTTGTACGGCGACAAACCCAACGAACACATCAAGCTGATGCG CTATCCGGGGCAAGCCTCGACCGCGAGCAATCAGGGCGTCGGTGCGCACAAGGATTCGGGTTTTCTCAGCTTCCTGCTGC AAGACCAGCAGGCCGGGCTGCAAGTGGAGATCGAAGAGGGGCGCTGGATCGATGCGCTGCCTCGGGACAATACGCTGGTG GTGAACATCGGCGAGCTGCTGGAGCTGGCCACCAACGGTTATCTGCGCGCCACGGTGCATCGGGTGGTGTCGCCACCAGT GGGCAGCGAGCGATTGTCCATCGCGTTTTTCCTCGGCGCGCAACTGGATGCGGTAGTGCCGCTGTACCCCTTGCCGACGG CGCTGTTGCGTGAGGCGCGTGGCCCGGCGAGTGATCCGCTCAATCCGCTGTTTCGCGATGTCGGCTGGAATTACCTGAAG GGCCGACTGCGCTCCCATCCCGATGTCGCGCAGCGTTTTTATGCCGATGCGTCGAATACCAGCACACCGCTGCGCAAGAC CGCCAACGCCTGA
Upstream 100 bases:
>100_bases ACGAATCAAAAGCATCAAACCGACAGACCCCCGATTGCCATGACGGCACACGCTGAATCGATCACAGGCTCTTCAGGTTT GATTCACACGGGAGTGAATC
Downstream 100 bases:
>100_bases TCCATCACTCGCAGAAGGACTCTTTCCATGTTGAAAAAAGCAGGCTTGACCCTGGCCGTCCTCGGCGCGCTGGTGACTTC GTTCAGTGCCCAGGCGCTCG
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPHTSKITALPILDLSLLDGTPSQRQAFLDDLRHAARDVGFFYLTGHGIDAGLLEQVQDYARQFFALPDSEKNAVGMINS PHFRGYNRAASEITRGQPDQREQFDLGAERDVLPLNADSPLWARLQGPNQWPGALPQLKPLLLDWQQAMTQMSLRLLRAF AQALSLPEDAFDRLYGDKPNEHIKLMRYPGQASTASNQGVGAHKDSGFLSFLLQDQQAGLQVEIEEGRWIDALPRDNTLV VNIGELLELATNGYLRATVHRVVSPPVGSERLSIAFFLGAQLDAVVPLYPLPTALLREARGPASDPLNPLFRDVGWNYLK GRLRSHPDVAQRFYADASNTSTPLRKTANA
Sequences:
>Translated_350_residues MPHTSKITALPILDLSLLDGTPSQRQAFLDDLRHAARDVGFFYLTGHGIDAGLLEQVQDYARQFFALPDSEKNAVGMINS PHFRGYNRAASEITRGQPDQREQFDLGAERDVLPLNADSPLWARLQGPNQWPGALPQLKPLLLDWQQAMTQMSLRLLRAF AQALSLPEDAFDRLYGDKPNEHIKLMRYPGQASTASNQGVGAHKDSGFLSFLLQDQQAGLQVEIEEGRWIDALPRDNTLV VNIGELLELATNGYLRATVHRVVSPPVGSERLSIAFFLGAQLDAVVPLYPLPTALLREARGPASDPLNPLFRDVGWNYLK GRLRSHPDVAQRFYADASNTSTPLRKTANA >Mature_349_residues PHTSKITALPILDLSLLDGTPSQRQAFLDDLRHAARDVGFFYLTGHGIDAGLLEQVQDYARQFFALPDSEKNAVGMINSP HFRGYNRAASEITRGQPDQREQFDLGAERDVLPLNADSPLWARLQGPNQWPGALPQLKPLLLDWQQAMTQMSLRLLRAFA QALSLPEDAFDRLYGDKPNEHIKLMRYPGQASTASNQGVGAHKDSGFLSFLLQDQQAGLQVEIEEGRWIDALPRDNTLVV NIGELLELATNGYLRATVHRVVSPPVGSERLSIAFFLGAQLDAVVPLYPLPTALLREARGPASDPLNPLFRDVGWNYLKG RLRSHPDVAQRFYADASNTSTPLRKTANA
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI28572124, Length=321, Percent_Identity=25.8566978193146, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 38808; Mature: 38677
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTSKITALPILDLSLLDGTPSQRQAFLDDLRHAARDVGFFYLTGHGIDAGLLEQVQDY CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH ARQFFALPDSEKNAVGMINSPHFRGYNRAASEITRGQPDQREQFDLGAERDVLPLNADSP HHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEECCCCCC LWARLQGPNQWPGALPQLKPLLLDWQQAMTQMSLRLLRAFAQALSLPEDAFDRLYGDKPN CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC EHIKLMRYPGQASTASNQGVGAHKDSGFLSFLLQDQQAGLQVEIEEGRWIDALPRDNTLV CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECCCCCCEEE VNIGELLELATNGYLRATVHRVVSPPVGSERLSIAFFLGAQLDAVVPLYPLPTALLREAR EEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC GPASDPLNPLFRDVGWNYLKGRLRSHPDVAQRFYADASNTSTPLRKTANA CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure PHTSKITALPILDLSLLDGTPSQRQAFLDDLRHAARDVGFFYLTGHGIDAGLLEQVQDY CCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH ARQFFALPDSEKNAVGMINSPHFRGYNRAASEITRGQPDQREQFDLGAERDVLPLNADSP HHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEECCCCCC LWARLQGPNQWPGALPQLKPLLLDWQQAMTQMSLRLLRAFAQALSLPEDAFDRLYGDKPN CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC EHIKLMRYPGQASTASNQGVGAHKDSGFLSFLLQDQQAGLQVEIEEGRWIDALPRDNTLV CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECCCCCCEEE VNIGELLELATNGYLRATVHRVVSPPVGSERLSIAFFLGAQLDAVVPLYPLPTALLREAR EEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC GPASDPLNPLFRDVGWNYLKGRLRSHPDVAQRFYADASNTSTPLRKTANA CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3130293 [H]