| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is xylY [H]
Identifier: 77458549
GI number: 77458549
Start: 2678602
End: 2679090
Strand: Direct
Name: xylY [H]
Synonym: Pfl01_2322
Alternate gene names: 77458549
Gene position: 2678602-2679090 (Clockwise)
Preceding gene: 77458548
Following gene: 77458550
Centisome position: 41.6
GC content: 58.69
Gene sequence:
>489_bases ATGAGCAACCTCTACGACACCGTGCGCGATTTTCTCTACCGCGAAGCACGTTATCTGGACGACGGACAGTGGGATCAGTG GCTGGAGCTCTACGCTGCCGACGCCAGTTTCTGGATGCCGGCCTGGGACGACCACGACACCCTGACCGAAGACCCGCAAA GCGAAATCTCGCTGATCTGGTACGGCAACCGTGGCGGTCTCGAAGACCGGGTGTTCCGGATCAAGACCGAGCGCTCCAGT GCGACCATCCCCGACACCCGCACCTCGCACAACCTCAGCAACATCGAGATCGTCGAGCAGGGCGAAGGGCAATGTCAGGT GCGCTTCAACTGGCACACCCTGAGCTTTCGCTATCAGGTCACCGACAGTTATTTCGGCACCAGCTTCTACACCCTCGACC TGCGCGGCGAACAGCCGCTGATCAAGGCCAAGAAAGTCGTGCTGAAGAACGATTACGTCCGTCAGGTCATCGACATCTAT CACATCTGA
Upstream 100 bases:
>100_bases AGGACGAAGGCCTGTTCGTGCTGCAACACAAGTACTGGCAGGAAACCATGCTCAAGGCCACCGCCAGCGATAAAAACCTG ATCCCCGTGGAGGCCGTGCA
Downstream 100 bases:
>100_bases TCGAGACGGCGCCGAGCCGGGCTCGACGCTGTGAGCGAGGTGCACCATGAGTTTCCAGATCGCACTGAATTTCGAAGACG GGGTCACCCGTTTCATCGAG
Product: 2-chlorobenzoate 1,2-dioxygenase
Products: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate; NAD+
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSNLYDTVRDFLYREARYLDDGQWDQWLELYAADASFWMPAWDDHDTLTEDPQSEISLIWYGNRGGLEDRVFRIKTERSS ATIPDTRTSHNLSNIEIVEQGEGQCQVRFNWHTLSFRYQVTDSYFGTSFYTLDLRGEQPLIKAKKVVLKNDYVRQVIDIY HI
Sequences:
>Translated_162_residues MSNLYDTVRDFLYREARYLDDGQWDQWLELYAADASFWMPAWDDHDTLTEDPQSEISLIWYGNRGGLEDRVFRIKTERSS ATIPDTRTSHNLSNIEIVEQGEGQCQVRFNWHTLSFRYQVTDSYFGTSFYTLDLRGEQPLIKAKKVVLKNDYVRQVIDIY HI >Mature_161_residues SNLYDTVRDFLYREARYLDDGQWDQWLELYAADASFWMPAWDDHDTLTEDPQSEISLIWYGNRGGLEDRVFRIKTERSSA TIPDTRTSHNLSNIEIVEQGEGQCQVRFNWHTLSFRYQVTDSYFGTSFYTLDLRGEQPLIKAKKVVLKNDYVRQVIDIYH I
Specific function: Unknown
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: 1.14.12.10
Molecular weight: Translated: 19217; Mature: 19086
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLYDTVRDFLYREARYLDDGQWDQWLELYAADASFWMPAWDDHDTLTEDPQSEISLIW CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCEEEEE YGNRGGLEDRVFRIKTERSSATIPDTRTSHNLSNIEIVEQGEGQCQVRFNWHTLSFRYQV ECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEE TDSYFGTSFYTLDLRGEQPLIKAKKVVLKNDYVRQVIDIYHI ECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SNLYDTVRDFLYREARYLDDGQWDQWLELYAADASFWMPAWDDHDTLTEDPQSEISLIW CHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCEEEEE YGNRGGLEDRVFRIKTERSSATIPDTRTSHNLSNIEIVEQGEGQCQVRFNWHTLSFRYQV ECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEEEEE TDSYFGTSFYTLDLRGEQPLIKAKKVVLKNDYVRQVIDIYHI ECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: benzoate; NADH; H+; O2
Specific reaction: benzoate + NADH + H+ + O2 = 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1938949 [H]