| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is qorA [H]
Identifier: 77458526
GI number: 77458526
Start: 2650430
End: 2651419
Strand: Reverse
Name: qorA [H]
Synonym: Pfl01_2299
Alternate gene names: 77458526
Gene position: 2651419-2650430 (Counterclockwise)
Preceding gene: 77458527
Following gene: 77458524
Centisome position: 41.18
GC content: 61.31
Gene sequence:
>990_bases ATGGCACGCATTGTCAGGATTCATGAATACGGTGACGCGAGTGTCCTGAAACTGGAAAACGTCGACGTCCCGGCGCCCGC TGCGGACGAAGTGCAGATCGAGGTCAAAGCCTTTGGCCTGAATCGCGCCGAAGTGATGTTCCGTAATCACGCCTATCTGC AGGAAGCGGAGTTTCCCAGTCGTCTCGGCTACGAAGCTGCTGGCGTGGTGGTCGCAGTCGACGCCAACACCAGCGAGTTC AAGATCGGTGATGCCGTCAGCCTGATTCCGCCGCTGGACATCGCGCGCTGGGGCACTTACGGCGAGCTGGCCAACGTGCC CGCCCACCTCACCGTCAAACACCCGCAGAACCTGTCGTTTGAACAAGCGGCAGCATCCTGGATGCAATACGTCACCGCGT GGGGTGCGCTGGTCGAACAGGCCAAATTGCACAAAGACGATTTCGTGATCGTCACCGCTGCCTCCAGCAGCGTCGGCCTG GCAGCCTTCCAGATCGCGAAAATGGTCGGCGCCACCTCGATTGCCGTCACCCGCACCCGTGCCAAGAAACAGGCCTTGCT CAACGCCGGCGCCGCACACGTGATCGTCAGCGACGAAGAAGACATGGTTGCAGCCGTCATGGCGCTGACCGACGGCAAAG GCGCGCGGGTGGTGTTCGATCCGGTGGGCGGCCCGTCGTTCGAACCGCTGACCCAAAGCATGGCGCGCGGCGGCATCCTG CTGGAGTACGGTGCCCTGAGCCCGGAACCGACGCCGTTCCCGCTGTTCACCGTGCTGGGCAAATGCCTGACCCTCAAGGG TTACCTCTATACGGAGATCGTCTCCGACCCGGCCATCCTGGCGCGCGCCAAGGCTTTCATCGGAGACGGACTGGCTTCGG GTGCGCTGAAACCGATCATTGCCAGGACATTTGCCCTGGATGACATTCAGGAAGCGCACCGTTTTCTTGAGGCCAATCAA CAGGTCGGGAAGATTGTCGTCATGGTTTGA
Upstream 100 bases:
>100_bases GTCATCCCAGGCCTTTATCCGAAGCAGTCCAAAGCCTAAATTGGCGTCCATGGCACTGGATCACGCCAGTGTAATTTCAT CGATAACCGAGGAAGTACAG
Downstream 100 bases:
>100_bases GGTGATGAGTCCCCTGCTCTGCTGTTTGCGGTAGAAACGACGAAAGCCTGCTTTTTTCAAAGCAGGCTTTCGTCCATCCG GCATCCGGTTATTTCTGATG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MARIVRIHEYGDASVLKLENVDVPAPAADEVQIEVKAFGLNRAEVMFRNHAYLQEAEFPSRLGYEAAGVVVAVDANTSEF KIGDAVSLIPPLDIARWGTYGELANVPAHLTVKHPQNLSFEQAAASWMQYVTAWGALVEQAKLHKDDFVIVTAASSSVGL AAFQIAKMVGATSIAVTRTRAKKQALLNAGAAHVIVSDEEDMVAAVMALTDGKGARVVFDPVGGPSFEPLTQSMARGGIL LEYGALSPEPTPFPLFTVLGKCLTLKGYLYTEIVSDPAILARAKAFIGDGLASGALKPIIARTFALDDIQEAHRFLEANQ QVGKIVVMV
Sequences:
>Translated_329_residues MARIVRIHEYGDASVLKLENVDVPAPAADEVQIEVKAFGLNRAEVMFRNHAYLQEAEFPSRLGYEAAGVVVAVDANTSEF KIGDAVSLIPPLDIARWGTYGELANVPAHLTVKHPQNLSFEQAAASWMQYVTAWGALVEQAKLHKDDFVIVTAASSSVGL AAFQIAKMVGATSIAVTRTRAKKQALLNAGAAHVIVSDEEDMVAAVMALTDGKGARVVFDPVGGPSFEPLTQSMARGGIL LEYGALSPEPTPFPLFTVLGKCLTLKGYLYTEIVSDPAILARAKAFIGDGLASGALKPIIARTFALDDIQEAHRFLEANQ QVGKIVVMV >Mature_328_residues ARIVRIHEYGDASVLKLENVDVPAPAADEVQIEVKAFGLNRAEVMFRNHAYLQEAEFPSRLGYEAAGVVVAVDANTSEFK IGDAVSLIPPLDIARWGTYGELANVPAHLTVKHPQNLSFEQAAASWMQYVTAWGALVEQAKLHKDDFVIVTAASSSVGLA AFQIAKMVGATSIAVTRTRAKKQALLNAGAAHVIVSDEEDMVAAVMALTDGKGARVVFDPVGGPSFEPLTQSMARGGILL EYGALSPEPTPFPLFTVLGKCLTLKGYLYTEIVSDPAILARAKAFIGDGLASGALKPIIARTFALDDIQEAHRFLEANQQ VGKIVVMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=336, Percent_Identity=30.0595238095238, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI22538444, Length=336, Percent_Identity=30.0595238095238, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI194239674, Length=336, Percent_Identity=28.2738095238095, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI13236495, Length=336, Percent_Identity=28.2738095238095, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI194239676, Length=331, Percent_Identity=28.0966767371601, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI18379349, Length=319, Percent_Identity=26.6457680250784, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI67078404, Length=320, Percent_Identity=28.125, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI67078406, Length=270, Percent_Identity=29.2592592592593, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI24308257, Length=346, Percent_Identity=24.2774566473988, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI28557745, Length=329, Percent_Identity=24.3161094224924, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790485, Length=339, Percent_Identity=32.4483775811209, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788073, Length=240, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17556000, Length=266, Percent_Identity=28.1954887218045, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17536829, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319520, Length=331, Percent_Identity=31.4199395770393, Blast_Score=133, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6324486, Length=340, Percent_Identity=24.4117647058824, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=341, Percent_Identity=23.7536656891496, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI45550423, Length=296, Percent_Identity=26.0135135135135, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24581345, Length=221, Percent_Identity=24.4343891402715, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI221330659, Length=220, Percent_Identity=21.3636363636364, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI19920632, Length=220, Percent_Identity=21.3636363636364, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35143; Mature: 35012
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIVRIHEYGDASVLKLENVDVPAPAADEVQIEVKAFGLNRAEVMFRNHAYLQEAEFPS CCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHEEECCCHHHHHCCCCH RLGYEAAGVVVAVDANTSEFKIGDAVSLIPPLDIARWGTYGELANVPAHLTVKHPQNLSF HCCCCCCCEEEEEECCCCCEECCCCEECCCCCCHHHCCCCCHHHCCCEEEEEECCCCCCH EQAAASWMQYVTAWGALVEQAKLHKDDFVIVTAASSSVGLAAFQIAKMVGATSIAVTRTR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHH AKKQALLNAGAAHVIVSDEEDMVAAVMALTDGKGARVVFDPVGGPSFEPLTQSMARGGIL HHHHHHHCCCCEEEEEECCCHHEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCEE LEYGALSPEPTPFPLFTVLGKCLTLKGYLYTEIVSDPAILARAKAFIGDGLASGALKPII EEECCCCCCCCCCHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHHCCCHHHCCHHHHH ARTFALDDIQEAHRFLEANQQVGKIVVMV HHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure ARIVRIHEYGDASVLKLENVDVPAPAADEVQIEVKAFGLNRAEVMFRNHAYLQEAEFPS CEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHEEECCCHHHHHCCCCH RLGYEAAGVVVAVDANTSEFKIGDAVSLIPPLDIARWGTYGELANVPAHLTVKHPQNLSF HCCCCCCCEEEEEECCCCCEECCCCEECCCCCCHHHCCCCCHHHCCCEEEEEECCCCCCH EQAAASWMQYVTAWGALVEQAKLHKDDFVIVTAASSSVGLAAFQIAKMVGATSIAVTRTR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHH AKKQALLNAGAAHVIVSDEEDMVAAVMALTDGKGARVVFDPVGGPSFEPLTQSMARGGIL HHHHHHHCCCCEEEEEECCCHHEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHCCCEE LEYGALSPEPTPFPLFTVLGKCLTLKGYLYTEIVSDPAILARAKAFIGDGLASGALKPII EEECCCCCCCCCCHHHHHHHHHHHHCCEEEEHHHCCHHHHHHHHHHHCCCHHHCCHHHHH ARTFALDDIQEAHRFLEANQQVGKIVVMV HHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]