| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458495
Identifier: 77458495
GI number: 77458495
Start: 2621051
End: 2621722
Strand: Direct
Name: 77458495
Synonym: Pfl01_2268
Alternate gene names: NA
Gene position: 2621051-2621722 (Clockwise)
Preceding gene: 77458494
Following gene: 77458496
Centisome position: 40.71
GC content: 66.22
Gene sequence:
>672_bases ATGCCGCGATGGCTGCTGAATTTAGTGCAAGTGCTGTGCGAAACCGGACAGGCCGACGACCTGCGCAAGCGGATAGACAA TGGCGGGGAGCCCGTGCCGCTGCGGCTGTTCCATCTCTGGCAGGCCGACGTGGTCCTGCCGATGCTCGGCGAAGCCTTGC CGGAACATCGGCAGTCGCTGCTCGCGTTGCAAAGCCTGCATCAGCGGGCGGCGCTCGGTGTGATCGGGCGTCAGGGCGAA TGGCGGGCCACGCTCAGACCGGTATTGCTGGCGCTGTATCGCAAGGCCTACCCCTACGACGCGGCGTACGCCAAGGCCCA CGCCAGTGCGCTGACCTACGGCCTCGCACCGGCCAACACCGCAATGATTGCCGAGCACTTTGGCGACGCCGAGGCGTTCG CCGAGTACTACGCGCAACTCAATACCGAGGCCGCCGCCACGGCGTTTGCCCAGGCTCATGCCAGCGCCAACGCCGAAGTC TCGGCCCGGGCCTTCGCGGACGGCGACGCAGAGACCTGCGCTCAGGTCTGTGGGGCATCCGTGCGGGTGTACATCGGGGC CTGCACGCAAACCGACGAACAGCGGCATGCCGCACTCAACCATCTCGCCGCCGGGCTCGAGCGAAGCCTGGCCACGCTGC AATCCCGTTCAACAGGAGAACGACATGAATGA
Upstream 100 bases:
>100_bases TGGACACCGATCACTACGGCATCGTGGCGGGCCGCTGGGCGCGGTTGCTGGCCGAAGTCATCGGTACGGATGAGCCATCG CCATGAGTGAGCCGATCTCG
Downstream 100 bases:
>100_bases CGCACAACTGCAATTCGATGTGGTGATCAACGCTCAGGGTCAGTATTCCCTGTGGCCGGCGGGCAAGCCGATGGCCAGCG GTTGGAGCGAGGCGGGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPRWLLNLVQVLCETGQADDLRKRIDNGGEPVPLRLFHLWQADVVLPMLGEALPEHRQSLLALQSLHQRAALGVIGRQGE WRATLRPVLLALYRKAYPYDAAYAKAHASALTYGLAPANTAMIAEHFGDAEAFAEYYAQLNTEAAATAFAQAHASANAEV SARAFADGDAETCAQVCGASVRVYIGACTQTDEQRHAALNHLAAGLERSLATLQSRSTGERHE
Sequences:
>Translated_223_residues MPRWLLNLVQVLCETGQADDLRKRIDNGGEPVPLRLFHLWQADVVLPMLGEALPEHRQSLLALQSLHQRAALGVIGRQGE WRATLRPVLLALYRKAYPYDAAYAKAHASALTYGLAPANTAMIAEHFGDAEAFAEYYAQLNTEAAATAFAQAHASANAEV SARAFADGDAETCAQVCGASVRVYIGACTQTDEQRHAALNHLAAGLERSLATLQSRSTGERHE >Mature_222_residues PRWLLNLVQVLCETGQADDLRKRIDNGGEPVPLRLFHLWQADVVLPMLGEALPEHRQSLLALQSLHQRAALGVIGRQGEW RATLRPVLLALYRKAYPYDAAYAKAHASALTYGLAPANTAMIAEHFGDAEAFAEYYAQLNTEAAATAFAQAHASANAEVS ARAFADGDAETCAQVCGASVRVYIGACTQTDEQRHAALNHLAAGLERSLATLQSRSTGERHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24175; Mature: 24044
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRWLLNLVQVLCETGQADDLRKRIDNGGEPVPLRLFHLWQADVVLPMLGEALPEHRQSL CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALQSLHQRAALGVIGRQGEWRATLRPVLLALYRKAYPYDAAYAKAHASALTYGLAPANT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH AMIAEHFGDAEAFAEYYAQLNTEAAATAFAQAHASANAEVSARAFADGDAETCAQVCGAS HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCC VRVYIGACTQTDEQRHAALNHLAAGLERSLATLQSRSTGERHE EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PRWLLNLVQVLCETGQADDLRKRIDNGGEPVPLRLFHLWQADVVLPMLGEALPEHRQSL CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALQSLHQRAALGVIGRQGEWRATLRPVLLALYRKAYPYDAAYAKAHASALTYGLAPANT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH AMIAEHFGDAEAFAEYYAQLNTEAAATAFAQAHASANAEVSARAFADGDAETCAQVCGAS HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCC VRVYIGACTQTDEQRHAALNHLAAGLERSLATLQSRSTGERHE EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA