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The map label for this gene is yeaM [H]

Identifier: 77458486

GI number: 77458486

Start: 2592361

End: 2593176

Strand: Direct

Name: yeaM [H]

Synonym: Pfl01_2259

Alternate gene names: 77458486

Gene position: 2592361-2593176 (Clockwise)

Preceding gene: 77458484

Following gene: 77458487

Centisome position: 40.26

GC content: 63.11

Gene sequence:

>816_bases
ATGAAACGAGAGGTGCGCAAGGTCATCGCCCAGCGTGAGTCCGCACCGCGCAGCGAACGTTATCCCGACTATCAGGACGT
GCCGCGCGTAATGACCGTGCTGGTGCGCGATCAGGCGACCGGCGAGTACAACGAACCGCACGTGCATCGGCACGGGCAAT
TGCTGTATGCCTCGAACGGCGTGATGCGGGTGGCTACCGAGCGCGGATTGTGGATCCTGCCGCCGAAACGGGCCCTGTGG
ATTCCACCCGGGGTGATCCACGACCAGTTGATGCTGAGCGCGGTCAAGATGCGCTCGATCTACATCGAGCCGCAGGTCTG
CGCAGGGCTGGGCGATCACTGCAAAGTACTGGAGATCCCCGGACTGCTGCGCGAGTTGATTCTGGCCTTGGCCGAGCAGC
CGATCGAATACCCGCAGGAAGGCCGCAACGCACACATCGTGGCGCTGATACTCAGTGAGTTGCAGGCGGCCCGGACGTTG
CCGATCGAAGTGCCGTGGCCGGTCGACCGGCGACTGGTCACGGTGTGCGAGGCGATTCTGCAGGACCCCGGACAAGACCA
TTCAATCGGCTATTGGGCAGACCGGGTCGGCGCCAGTTCGCGAACGCTGATTCGCCTGTTCGTCAATGAAACCGGCCTGA
ATTTCCGCCACTGGCTGCAACAGGTGCGGCTGGCGACCGCCATCGACCGGCTCGACCAGGGGCAATCCGTCGGGGTGATT
GCCCGGGATCTGGGTTACGCCAGCCAGAGTGCCTTCAGTGCCATGTTCAGACGGGTGATGGGCGAATCGCCTCGTGAATT
TCTCGTCCGCGACTAG

Upstream 100 bases:

>100_bases
GCTAACAATGGGCCGGCCATGGCAAATGCCAGGGTTTGTCGCCAAAGTGACAATTGCCGCTTTAACACGATCAAGGTCTG
TTTTCAGGAGACTCCAGCCG

Downstream 100 bases:

>100_bases
GGCGTTCAGGCGATTCCGATACCTTTGTATTCTGTCGTCGAAGGGAGGCGGGTGGTATCAATGACGCTGCTGTTGCAGGT
GCACTGAACACCCACCCGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKREVRKVIAQRESAPRSERYPDYQDVPRVMTVLVRDQATGEYNEPHVHRHGQLLYASNGVMRVATERGLWILPPKRALW
IPPGVIHDQLMLSAVKMRSIYIEPQVCAGLGDHCKVLEIPGLLRELILALAEQPIEYPQEGRNAHIVALILSELQAARTL
PIEVPWPVDRRLVTVCEAILQDPGQDHSIGYWADRVGASSRTLIRLFVNETGLNFRHWLQQVRLATAIDRLDQGQSVGVI
ARDLGYASQSAFSAMFRRVMGESPREFLVRD

Sequences:

>Translated_271_residues
MKREVRKVIAQRESAPRSERYPDYQDVPRVMTVLVRDQATGEYNEPHVHRHGQLLYASNGVMRVATERGLWILPPKRALW
IPPGVIHDQLMLSAVKMRSIYIEPQVCAGLGDHCKVLEIPGLLRELILALAEQPIEYPQEGRNAHIVALILSELQAARTL
PIEVPWPVDRRLVTVCEAILQDPGQDHSIGYWADRVGASSRTLIRLFVNETGLNFRHWLQQVRLATAIDRLDQGQSVGVI
ARDLGYASQSAFSAMFRRVMGESPREFLVRD
>Mature_271_residues
MKREVRKVIAQRESAPRSERYPDYQDVPRVMTVLVRDQATGEYNEPHVHRHGQLLYASNGVMRVATERGLWILPPKRALW
IPPGVIHDQLMLSAVKMRSIYIEPQVCAGLGDHCKVLEIPGLLRELILALAEQPIEYPQEGRNAHIVALILSELQAARTL
PIEVPWPVDRRLVTVCEAILQDPGQDHSIGYWADRVGASSRTLIRLFVNETGLNFRHWLQQVRLATAIDRLDQGQSVGVI
ARDLGYASQSAFSAMFRRVMGESPREFLVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=233, Percent_Identity=33.9055793991416, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 30738; Mature: 30738

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREVRKVIAQRESAPRSERYPDYQDVPRVMTVLVRDQATGEYNEPHVHRHGQLLYASNG
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
VMRVATERGLWILPPKRALWIPPGVIHDQLMLSAVKMRSIYIEPQVCAGLGDHCKVLEIP
EEEEEECCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHEECCHHHCCCCCCCEEEEHH
GLLRELILALAEQPIEYPQEGRNAHIVALILSELQAARTLPIEVPWPVDRRLVTVCEAIL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
QDPGQDHSIGYWADRVGASSRTLIRLFVNETGLNFRHWLQQVRLATAIDRLDQGQSVGVI
HCCCCCCCCCHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
ARDLGYASQSAFSAMFRRVMGESPREFLVRD
HHHHCCHHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure
MKREVRKVIAQRESAPRSERYPDYQDVPRVMTVLVRDQATGEYNEPHVHRHGQLLYASNG
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
VMRVATERGLWILPPKRALWIPPGVIHDQLMLSAVKMRSIYIEPQVCAGLGDHCKVLEIP
EEEEEECCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHEECCHHHCCCCCCCEEEEHH
GLLRELILALAEQPIEYPQEGRNAHIVALILSELQAARTLPIEVPWPVDRRLVTVCEAIL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
QDPGQDHSIGYWADRVGASSRTLIRLFVNETGLNFRHWLQQVRLATAIDRLDQGQSVGVI
HCCCCCCCCCHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
ARDLGYASQSAFSAMFRRVMGESPREFLVRD
HHHHCCHHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]