| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458434
Identifier: 77458434
GI number: 77458434
Start: 2493181
End: 2493657
Strand: Reverse
Name: 77458434
Synonym: Pfl01_2207
Alternate gene names: NA
Gene position: 2493657-2493181 (Counterclockwise)
Preceding gene: 77458435
Following gene: 77458431
Centisome position: 38.73
GC content: 59.96
Gene sequence:
>477_bases ATGAACCCTTTTCTGAACCACATCAAACGCGCCGCACTGGGCCTGTCCCTGCTGGGCCTGGCTTTCCAGGTATCGGCGCA GACCAAAGTCGACGACGCCTGGGTGCGTGCGACCGTGCCGAACCAGTCGGCCAGCGGCGCATTCATGACCGTCACCGCCG ACAGCGACAGCAAGCTGCTCAGCGTTGCTTCGCCGGCGGCCAAGGACGTGCAGATTCATGAGATGACCATGAAGAACGAC GTGATGAGCATGGGCCCGGTGAAATCGGTCGACCTGCCGGCGGGCAAAGCCATCAACTTCGATCCGAATGGCTACCATGT GATGCTGATGGGCCTGAGCGCTCAGTTGAAGGAAGGCGACAGCGTGCCGCTGACCCTGACTATCGAAAACGCCAAGGGCG AAAAGGAAACCGTGGAAGTGAAAGCGCCGGTCAAGGCGCTGACCATGGAAGGCCACGATCACAGCAAGATGCATTGA
Upstream 100 bases:
>100_bases ATGTCTACGACACCCGGGGCACATTGCGTGTGGGCCTGTCTCAATCGCTTTCTGCACAAGAGTGCACGGAAGATTTGCTT ACCGTCATGGAGGTCTGCTG
Downstream 100 bases:
>100_bases TCGCTGACTGACAGATACACGGCTTCAAAAAACAAAAGGGGCGGCATGATCGATGATCATGCCGCCCCTTTTGCATCTGA ATGTCAGACCAGTTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNPFLNHIKRAALGLSLLGLAFQVSAQTKVDDAWVRATVPNQSASGAFMTVTADSDSKLLSVASPAAKDVQIHEMTMKND VMSMGPVKSVDLPAGKAINFDPNGYHVMLMGLSAQLKEGDSVPLTLTIENAKGEKETVEVKAPVKALTMEGHDHSKMH
Sequences:
>Translated_158_residues MNPFLNHIKRAALGLSLLGLAFQVSAQTKVDDAWVRATVPNQSASGAFMTVTADSDSKLLSVASPAAKDVQIHEMTMKND VMSMGPVKSVDLPAGKAINFDPNGYHVMLMGLSAQLKEGDSVPLTLTIENAKGEKETVEVKAPVKALTMEGHDHSKMH >Mature_158_residues MNPFLNHIKRAALGLSLLGLAFQVSAQTKVDDAWVRATVPNQSASGAFMTVTADSDSKLLSVASPAAKDVQIHEMTMKND VMSMGPVKSVDLPAGKAINFDPNGYHVMLMGLSAQLKEGDSVPLTLTIENAKGEKETVEVKAPVKALTMEGHDHSKMH
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 16870; Mature: 16870
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFLNHIKRAALGLSLLGLAFQVSAQTKVDDAWVRATVPNQSASGAFMTVTADSDSKLL CCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE SVASPAAKDVQIHEMTMKNDVMSMGPVKSVDLPAGKAINFDPNGYHVMLMGLSAQLKEGD EECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC SVPLTLTIENAKGEKETVEVKAPVKALTMEGHDHSKMH CCEEEEEEECCCCCCEEEEEECCEEEEEECCCCCCCCC >Mature Secondary Structure MNPFLNHIKRAALGLSLLGLAFQVSAQTKVDDAWVRATVPNQSASGAFMTVTADSDSKLL CCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE SVASPAAKDVQIHEMTMKNDVMSMGPVKSVDLPAGKAINFDPNGYHVMLMGLSAQLKEGD EECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC SVPLTLTIENAKGEKETVEVKAPVKALTMEGHDHSKMH CCEEEEEEECCCCCCEEEEEECCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA