| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458432
Identifier: 77458432
GI number: 77458432
Start: 2491510
End: 2492523
Strand: Direct
Name: 77458432
Synonym: Pfl01_2205
Alternate gene names: NA
Gene position: 2491510-2492523 (Clockwise)
Preceding gene: 77458429
Following gene: 77458433
Centisome position: 38.7
GC content: 58.28
Gene sequence:
>1014_bases ATGACCCTACCGTTCAAACGTTCTGCACTGACGCTGCTGGCGGCCTCGCTGGCTGGCGCACTGCTCGGCAACACTGCGCA AGCCGAAGGCAAGATCAGCATCGCCCAGCAATTCGGCATCGGTTATCTGATTCTGGATGTGGTGCGCGATCAGCAATTGA TCGAGAAACACGGCAAGGCTCAGGGTCTGGACATCAAGGTCGACTGGAACAGCATTTCCGGCGCCACCGCGATGAACGAA GCATTGCTCACCGGATCGCTGGACGTGGTCTCGGCGGGCGTGCCGCCGATGCTCACCGTATGGGATCGCACCAAGGGCAA GCAGAACGTCAAGGCCATCGCTTCGCTGGGTTCGATGCCCAACTACCTGCTGACCAATAACCCGAACGTGAAAACCCTCA AGGACTTCAGCGACAAGGATCGCATCGCCGTGCCGGCGGCGGGCGTGGGCTTCCAGTCACGCACGCTGCAGATCGAAACG GCCAAGGAATTCGGCAATGACCACTACAAGAAATTCGACGACATCTCCGTCAGCCTGCCGCACCCGGATGCCACGGCTGC ACTGATCGCCGGCGGCTCGGAAATCAACGCGCATTTCTCCAGCCCGCCGTTCCAGTATCAGGCGTTGCAGAATCCCAACG TGCACAAAGTGCTGAGTTCCTACGACGTGCTCGGCGGCCAGGCCACGTTCAACGTGCTCTACACCACGGAAAAATTCCAC GACGAAAACCCGAAAACCTACAAGGCTTTCTATGACGCCTTGGCCGAGGCCGAGAAGATCATCAAGGCCGACAAACCTGC GGCGGCTCAGGCCTACATTCGGGTTGAACAGTCAAAGCTGCCGCTGGCGCTGGTTGAGAAAATCGTCACCGACCCGGAAA TCGATTTCACCGTGGTGCCGCAACGCACCTTTATCTATGCAGAGAAATTGCAGGAGCTGGGCGTGCTGAAGAACAAGGCG GACAGCTGGAAGGATTATTTCTTTGAAGAGGCGCATGGCGGGGCGGGAAGTTGA
Upstream 100 bases:
>100_bases CAAGGTGATATCAATATGCGATAACGGTATTTAAATTTCGTTTTTTATAGCGATAGAGTCCCGCCTCACAGATTTCCCTG TAAATCACTGCGAGGTTGTC
Downstream 100 bases:
>100_bases GCAGTCGTGATTGCTGAACCATCCGCCCATCCTCTTGCCGGGTGAGCGGTAAACCCGCGTCTATAGTGAGAGGGCTGTGT GAAACGGGTGGCGCACCTCA
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKAQGLDIKVDWNSISGATAMNE ALLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMPNYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIET AKEFGNDHYKKFDDISVSLPHPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFH DENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVPQRTFIYAEKLQELGVLKNKA DSWKDYFFEEAHGGAGS
Sequences:
>Translated_337_residues MTLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKAQGLDIKVDWNSISGATAMNE ALLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMPNYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIET AKEFGNDHYKKFDDISVSLPHPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFH DENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVPQRTFIYAEKLQELGVLKNKA DSWKDYFFEEAHGGAGS >Mature_336_residues TLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKAQGLDIKVDWNSISGATAMNEA LLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMPNYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIETA KEFGNDHYKKFDDISVSLPHPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFHD ENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVPQRTFIYAEKLQELGVLKNKAD SWKDYFFEEAHGGAGS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36644; Mature: 36513
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCC QGLDIKVDWNSISGATAMNEALLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMP CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC NYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIETAKEFGNDHYKKFDDISVSLP CEEEECCCCCCEECCCCCCCCEEECCCCCCCCCCEEEEEEHHHHCCHHHHCCCCEEEECC HPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFH CCCCCEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEHHHC DENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHCCCCCCEEEEC QRTFIYAEKLQELGVLKNKADSWKDYFFEEAHGGAGS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLPFKRSALTLLAASLAGALLGNTAQAEGKISIAQQFGIGYLILDVVRDQQLIEKHGKA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCC QGLDIKVDWNSISGATAMNEALLTGSLDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMP CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC NYLLTNNPNVKTLKDFSDKDRIAVPAAGVGFQSRTLQIETAKEFGNDHYKKFDDISVSLP CEEEECCCCCCEECCCCCCCCEEECCCCCCCCCCEEEEEEHHHHCCHHHHCCCCEEEECC HPDATAALIAGGSEINAHFSSPPFQYQALQNPNVHKVLSSYDVLGGQATFNVLYTTEKFH CCCCCEEEEECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEHHHC DENPKTYKAFYDALAEAEKIIKADKPAAAQAYIRVEQSKLPLALVEKIVTDPEIDFTVVP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHCCCCCCEEEEC QRTFIYAEKLQELGVLKNKADSWKDYFFEEAHGGAGS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA