| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458431
Identifier: 77458431
GI number: 77458431
Start: 2490921
End: 2491256
Strand: Reverse
Name: 77458431
Synonym: Pfl01_2204
Alternate gene names: NA
Gene position: 2491256-2490921 (Counterclockwise)
Preceding gene: 77458434
Following gene: 77458430
Centisome position: 38.69
GC content: 48.51
Gene sequence:
>336_bases ATGAGTCACCTCTCTCGGCAGAATCTAGGCCCAAACACCGCCACCTTTAAGGACTTCGAAATCGAAGGTTTAAACCCTGT AGACATGACGATTTCCTTGAGGGCGATCTCCGCTCAAGGGGCGAGAGTCACAACTAAACTTGCGACAAACGGACTCACAG TAGATCTCCTTAATCCCGACTCACTGCGAATGGAGCGCAAGTCTCAAACAACGCGAATTCTGGACACAATCATCCCTCGC TCGTATCTGGAAGATGCATATAACAAGAACCTGGATTGCATATTGATCGCTACGGGGATCGGCATGGTCTTCGGATTAAT CAAGGTCATCTCGTAA
Upstream 100 bases:
>100_bases TGATCTAAAAAACTGACAAGTTTGACAGGTTCAGCAACGACATTTGCTCACTAATCTGCTGAGAGGTTATTTCCGACCGC AATTTCACAGGAATCTTAAA
Downstream 100 bases:
>100_bases TAACTGCGATAAGAGTAGCTGAGCCGCTACAGCTACTTGGCGCTTCATCCCTTTGGGCTGCAACCGCTGCGAGAAGGAGC GAAGATGTTGCTCCGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSHLSRQNLGPNTATFKDFEIEGLNPVDMTISLRAISAQGARVTTKLATNGLTVDLLNPDSLRMERKSQTTRILDTIIPR SYLEDAYNKNLDCILIATGIGMVFGLIKVIS
Sequences:
>Translated_111_residues MSHLSRQNLGPNTATFKDFEIEGLNPVDMTISLRAISAQGARVTTKLATNGLTVDLLNPDSLRMERKSQTTRILDTIIPR SYLEDAYNKNLDCILIATGIGMVFGLIKVIS >Mature_110_residues SHLSRQNLGPNTATFKDFEIEGLNPVDMTISLRAISAQGARVTTKLATNGLTVDLLNPDSLRMERKSQTTRILDTIIPRS YLEDAYNKNLDCILIATGIGMVFGLIKVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12209; Mature: 12078
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLSRQNLGPNTATFKDFEIEGLNPVDMTISLRAISAQGARVTTKLATNGLTVDLLNPD CCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCC SLRMERKSQTTRILDTIIPRSYLEDAYNKNLDCILIATGIGMVFGLIKVIS HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure SHLSRQNLGPNTATFKDFEIEGLNPVDMTISLRAISAQGARVTTKLATNGLTVDLLNPD CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCC SLRMERKSQTTRILDTIIPRSYLEDAYNKNLDCILIATGIGMVFGLIKVIS HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA