| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458421
Identifier: 77458421
GI number: 77458421
Start: 2477743
End: 2478693
Strand: Reverse
Name: 77458421
Synonym: Pfl01_2194
Alternate gene names: NA
Gene position: 2478693-2477743 (Counterclockwise)
Preceding gene: 77458428
Following gene: 77458418
Centisome position: 38.5
GC content: 67.19
Gene sequence:
>951_bases ATGATCCTATTTCCCGATTTGCTTCAGTTACCCCACCAGTTACGCCCCCCCGAGGTGCGTGATCTGGCGTGGGTGATCCT CGCCCCGCCGATGCTCGCCGCCACCCCGTGGCCGCAGCGCCATCCGCTGGCGGGCAGCGACTGGGTCAGCGACCCCGAGC GTCTGGAACACTGGCTGCGCCAGCTCGACCGCGACAGTTACGGCCTGCTGCACTGGCTGTCCCAGGCCCGCACCCGGCGC CTGGGCCTGTATTACGAACGGTTGTGGCAATTTGCGGTGAAACACGCGCCGGGCATCGAACTGATTGCCGCCAACCTGCC GATCCGCCGCGAAGGCCACACCCTCGGCGAGCTGGACATGCTTTTGCGCGACCGCGACGGCGTGCACCACCTGGAACTGG CGATCAAGCTCTACCTCGGCCCGCAGAACGGCGACGGTCATGATCCGGCGTCGTGGCTGGGGCCGGGTTGTCATGATCGA CTGGATCGCAAACTGGCGCATTTGAGCGAACATCAGCTGCCGATCTCCGCGCGCCCGGAAAGCCGCGAAGTGCTGGCGGC GCTGGATGTCGGGTCGTTCAGTGCGCAACTGTGGCTGGGTGGGTATCTGCTGTATCCGTGGCCCGGCCAGTCCGTGCCGC CCAGCGGCGCCCATCCTCAGCATTTGCGTGGCAGCTGGCTGCATCAGAAAGACTGGCCGGCGTTCGTCGCCCAGCGCCCG GACGGACGCTGGCAACCCCTGCCCCGCCACGCCTGGCTGGCGCCGGCGCACTACCCGGCGGAGCAGACCTGGAGCAACGG GCACTTGCAGGCCTGGCTCGATGAACTCGAACCGCTGGCCCCGGCGCAATTGATGGTGCGCCTGACCGAAAATGCCCGGG GCGAGTGGGAAGAAGCCGAGCGGCTGTTTCTGGTGTCGGACCTGTGGCCGAACGTGCCCGGGCAGAGTTAG
Upstream 100 bases:
>100_bases GACTGAGACGGCGAAAAGCACGATTATGGGCGAAAGCGCCGGATAGACAAAATCCTTTCAGCCCCGAGGATGCACCGGTG TTTGAGGCTATGCTCGCAAG
Downstream 100 bases:
>100_bases ACGCTCAACCGCAACGCCAGAGCAGCCAATGTCACCAGCAACACCGGCACCGTCAGCACAATCCCGACCTTGAAGTAATA ACCCCAGCCAATCCGGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MILFPDLLQLPHQLRPPEVRDLAWVILAPPMLAATPWPQRHPLAGSDWVSDPERLEHWLRQLDRDSYGLLHWLSQARTRR LGLYYERLWQFAVKHAPGIELIAANLPIRREGHTLGELDMLLRDRDGVHHLELAIKLYLGPQNGDGHDPASWLGPGCHDR LDRKLAHLSEHQLPISARPESREVLAALDVGSFSAQLWLGGYLLYPWPGQSVPPSGAHPQHLRGSWLHQKDWPAFVAQRP DGRWQPLPRHAWLAPAHYPAEQTWSNGHLQAWLDELEPLAPAQLMVRLTENARGEWEEAERLFLVSDLWPNVPGQS
Sequences:
>Translated_316_residues MILFPDLLQLPHQLRPPEVRDLAWVILAPPMLAATPWPQRHPLAGSDWVSDPERLEHWLRQLDRDSYGLLHWLSQARTRR LGLYYERLWQFAVKHAPGIELIAANLPIRREGHTLGELDMLLRDRDGVHHLELAIKLYLGPQNGDGHDPASWLGPGCHDR LDRKLAHLSEHQLPISARPESREVLAALDVGSFSAQLWLGGYLLYPWPGQSVPPSGAHPQHLRGSWLHQKDWPAFVAQRP DGRWQPLPRHAWLAPAHYPAEQTWSNGHLQAWLDELEPLAPAQLMVRLTENARGEWEEAERLFLVSDLWPNVPGQS >Mature_316_residues MILFPDLLQLPHQLRPPEVRDLAWVILAPPMLAATPWPQRHPLAGSDWVSDPERLEHWLRQLDRDSYGLLHWLSQARTRR LGLYYERLWQFAVKHAPGIELIAANLPIRREGHTLGELDMLLRDRDGVHHLELAIKLYLGPQNGDGHDPASWLGPGCHDR LDRKLAHLSEHQLPISARPESREVLAALDVGSFSAQLWLGGYLLYPWPGQSVPPSGAHPQHLRGSWLHQKDWPAFVAQRP DGRWQPLPRHAWLAPAHYPAEQTWSNGHLQAWLDELEPLAPAQLMVRLTENARGEWEEAERLFLVSDLWPNVPGQS
Specific function: Unknown
COG id: COG3782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36167; Mature: 36167
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFPDLLQLPHQLRPPEVRDLAWVILAPPMLAATPWPQRHPLAGSDWVSDPERLEHWLR CCCCCHHHHCHHHCCCCCHHHEEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH QLDRDSYGLLHWLSQARTRRLGLYYERLWQFAVKHAPGIELIAANLPIRREGHTLGELDM HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH LLRDRDGVHHLELAIKLYLGPQNGDGHDPASWLGPGCHDRLDRKLAHLSEHQLPISARPE HHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC SREVLAALDVGSFSAQLWLGGYLLYPWPGQSVPPSGAHPQHLRGSWLHQKDWPAFVAQRP CHHEEEEECCCCCCEEEEECCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHHEEECC DGRWQPLPRHAWLAPAHYPAEQTWSNGHLQAWLDELEPLAPAQLMVRLTENARGEWEEAE CCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH RLFLVSDLWPNVPGQS EEEEEHHHCCCCCCCC >Mature Secondary Structure MILFPDLLQLPHQLRPPEVRDLAWVILAPPMLAATPWPQRHPLAGSDWVSDPERLEHWLR CCCCCHHHHCHHHCCCCCHHHEEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH QLDRDSYGLLHWLSQARTRRLGLYYERLWQFAVKHAPGIELIAANLPIRREGHTLGELDM HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH LLRDRDGVHHLELAIKLYLGPQNGDGHDPASWLGPGCHDRLDRKLAHLSEHQLPISARPE HHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC SREVLAALDVGSFSAQLWLGGYLLYPWPGQSVPPSGAHPQHLRGSWLHQKDWPAFVAQRP CHHEEEEECCCCCCEEEEECCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCHHEEECC DGRWQPLPRHAWLAPAHYPAEQTWSNGHLQAWLDELEPLAPAQLMVRLTENARGEWEEAE CCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH RLFLVSDLWPNVPGQS EEEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA