| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gloB
Identifier: 77458411
GI number: 77458411
Start: 2468410
End: 2469177
Strand: Reverse
Name: gloB
Synonym: Pfl01_2184
Alternate gene names: 77458411
Gene position: 2469177-2468410 (Counterclockwise)
Preceding gene: 77458417
Following gene: 77458410
Centisome position: 38.35
GC content: 61.2
Gene sequence:
>768_bases ATGATACAGATCAGTGCCCTGCCCGCCTTCACCGACAACTACATCTGGTTGTTACAGGATCATGCCACCCAGCGTTGTGC AGTGGTCGATCCGGGGGATGCCGCCCCGGTGCAGGCGTGGCTCGACGCGCATCCGGGCTGGGTGCTCGGCGACATCCTCA TCACTCACCATCACCACGACCATGTCGGCGGCGTCGAGACGCTGAAAAAGGCCACCGGTGCCACGGTCTATGGACCGGCC AGCGAAAACATTCCGGGGCGGGACGTGGCCCTCAAGGACAACGACACGGTGCGCGTGCTCGGCTGGGACTTCGATGTCTA TGCCGTTCCCGGCCACACCCTCGGACACATCGCCTACTACCATCACGGCCTGCTGTTTTGCGGTGACACCCTGTTCGCTG CCGGCTGCGGCCGTCTGTTCGAAGGCACGCCGCAACAAATGCACCAGTCGTTGAGCCGTCTGGCGGCGCTGCCGGAAGAC ACGCTGGTCTACTGCACCCACGAGTACACCCTGAGCAACCTGAAATTCGCTGCTGCCGTGGAGCCGGACAACCGGGACAT CGCCGCCCGTCTGGAAAAAGTCACCCGGCAACGTGAGAACGGTGTCATGACCCTGCCCTCGACCCTTGCGCTGGAAAAAC TCACAAACCCGTTTTTGCGCACCGGTGAAATATTAGTTACACAAAAAGTGGACGAACGGAACGGCCCTCAGAACCGGGCG CCGAGTGAGGTTTTTGCGGCTCTGCGGGCATGGAAAGATACGTTCTGA
Upstream 100 bases:
>100_bases TCAGGATCGGCCTGAGCGAACGCTTTATCGATCATTGCATTCTCCAACACGCCAGGAACCTCTAAGATGCGCCAATGTTA CCCGCTTGGCGAATTCGACG
Downstream 100 bases:
>100_bases GTGGCTCGCCGCCTGGTACAAAAATTCTGAATGGTTGACCGCAGGGGGTGCGCTTTCTAGAATCGCCCGACATTTTTGCC CGGAACTTACTTCCAGCCAA
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHDHVGGVETLKKATGATVYGPA SENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYYHHGLLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPED TLVYCTHEYTLSNLKFAAAVEPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRA PSEVFAALRAWKDTF
Sequences:
>Translated_255_residues MIQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHDHVGGVETLKKATGATVYGPA SENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYYHHGLLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPED TLVYCTHEYTLSNLKFAAAVEPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRA PSEVFAALRAWKDTF >Mature_255_residues MIQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHDHVGGVETLKKATGATVYGPA SENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYYHHGLLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPED TLVYCTHEYTLSNLKFAAAVEPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRA PSEVFAALRAWKDTF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538320, Length=263, Percent_Identity=39.9239543726236, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI94538322, Length=263, Percent_Identity=39.9239543726236, Blast_Score=161, Evalue=4e-40, Organism=Homo sapiens, GI116642887, Length=263, Percent_Identity=36.8821292775665, Blast_Score=150, Evalue=8e-37, Organism=Homo sapiens, GI21703352, Length=263, Percent_Identity=36.8821292775665, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI14150041, Length=263, Percent_Identity=36.5019011406844, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI46361987, Length=199, Percent_Identity=37.1859296482412, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI41327741, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786406, Length=255, Percent_Identity=50.1960784313725, Blast_Score=224, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17536925, Length=240, Percent_Identity=37.5, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17538952, Length=167, Percent_Identity=28.7425149700599, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320478, Length=261, Percent_Identity=29.5019157088123, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324614, Length=275, Percent_Identity=31.2727272727273, Blast_Score=83, Evalue=5e-17, Organism=Drosophila melanogaster, GI24667711, Length=264, Percent_Identity=39.3939393939394, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI21356335, Length=264, Percent_Identity=39.3939393939394, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI24667703, Length=264, Percent_Identity=39.3939393939394, Blast_Score=173, Evalue=9e-44, Organism=Drosophila melanogaster, GI221330176, Length=165, Percent_Identity=32.1212121212121, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_PSEPF (Q3KE79)
Other databases:
- EMBL: CP000094 - RefSeq: YP_347916.1 - ProteinModelPortal: Q3KE79 - SMR: Q3KE79 - STRING: Q3KE79 - GeneID: 3715725 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_2184 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: WCAHEYT - ProtClustDB: CLSK866802 - BioCyc: PFLU205922:PFL_2184-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28126; Mature: 28126
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHD CEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCC HVGGVETLKKATGATVYGPASENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYY CCCHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCEEEEEEECEEEEECCCCHHHHHHHH HHGLLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPEDTLVYCTHEYTLSNLKFAAAV HCCEEEECCHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCEEEEEEE EPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRA CCCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCHHHHCCCEEEEEECCCCCCCCCCC PSEVFAALRAWKDTF HHHHHHHHHHHHCCC >Mature Secondary Structure MIQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHD CEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCC HVGGVETLKKATGATVYGPASENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYY CCCHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCEEEEEEECEEEEECCCCHHHHHHHH HHGLLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPEDTLVYCTHEYTLSNLKFAAAV HCCEEEECCHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCEEEEEEE EPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRA CCCCCHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCHHHHCCCEEEEEECCCCCCCCCCC PSEVFAALRAWKDTF HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA